Detailed information NTG0040894

Bioinformatically predicted

Overview

• Name: irvR
• Type: Regulator
• Locus tag: SSUD12_RS07970
• Genome accession: NC_017621
• Coordinates: 1602669..1603436 (+)
• Length: 255 a.a.
• NCBI ID: WP_014638444.1
• Uniprot ID: -
• Organism: Streptococcus suis D12
• Function: regulate expression of competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 1597669..1608436

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SSUD12_RS07930 (SSUD12_1597)	-	1597822..1599081 (+)	1260	WP_014638436.1	hydroxymethylglutaryl-CoA reductase, degradative	-
SSUD12_RS07935 (SSUD12_1598)	-	1599102..1599569 (-)	468	WP_014638437.1	GNAT family N-acetyltransferase	-
SSUD12_RS07940 (SSUD12_1599)	-	1599905..1600286 (-)	382	Protein_1522	transposase	-
SSUD12_RS07945	-	1600288..1600575 (-)	288	WP_041179226.1	hypothetical protein	-
SSUD12_RS07950 (SSUD12_1600)	-	1600572..1600883 (-)	312	WP_041179227.1	hypothetical protein	-
SSUD12_RS07955 (SSUD12_1601)	-	1600963..1601157 (-)	195	WP_014638440.1	helix-turn-helix domain-containing protein	-
SSUD12_RS07960 (SSUD12_1602)	-	1601380..1601562 (+)	183	WP_014638441.1	YegP family protein	-
SSUD12_RS11625	-	1602057..1602218 (-)	162	WP_153308532.1	hypothetical protein	-
SSUD12_RS07970 (SSUD12_1605)	irvR	1602669..1603436 (+)	768	WP_014638444.1	S24 family peptidase	Regulator
SSUD12_RS07975 (SSUD12_1606)	-	1603440..1604339 (+)	900	WP_014638445.1	ATP-binding region, ATPase	-
SSUD12_RS07980 (SSUD12_1607)	-	1604355..1604714 (+)	360	WP_014638446.1	STAS-like domain-containing protein	-
SSUD12_RS07985 (SSUD12_1608)	-	1604711..1605250 (+)	540	WP_014638447.1	type II toxin-antitoxin system VapC family toxin	-
SSUD12_RS07990 (SSUD12_1610)	-	1605377..1606537 (+)	1161	Protein_1532	tyrosine-type recombinase/integrase	-
SSUD12_RS07995 (SSUD12_1612)	-	1606864..1607139 (-)	276	WP_002936247.1	HU family DNA-binding protein	-
SSUD12_RS08000 (SSUD12_1613)	-	1607229..1607825 (-)	597	WP_002936249.1	YpmS family protein	-

Sequence

Protein

• Length: 255 a.a.
• Molecular weight: 28855.14 Da
• Isoelectric Point: 4.8041

>NTDB_id=40894 SSUD12_RS07970 WP_014638444.1 1602669..1603436(+) (irvR) [Streptococcus suis D12]
MARGRGKATPHDLEAMQHVSGMLQRLLAENDLKQSHLADRLEIPRSSFNEYVKGTALPRPGNVQKIADYFGLKKSNIDPR
FKSTIPSATPKTVSDDVLRLDRDLHSNNHKSWIRYGNELLDKQNTVNEPQAVYFTYNYYDQPASAGTGQYLNDVKVETIE
LPIEVDADFVVPIYGDSMEPEYHSGDYVFVKLSVDLSDGDIGVFAYNGDAYIKQLRITDQGAYLHSLNPDYDNIPITADT
DFRTIGEVVEVYRER

Nucleotide

• Length: 768 bp

>NTDB_id=40894 SSUD12_RS07970 WP_014638444.1 1602669..1603436(+) (irvR) [Streptococcus suis D12]
ATGGCCAGAGGGCGAGGAAAAGCAACCCCGCATGACCTAGAAGCAATGCAACATGTTTCAGGTATGCTTCAAAGGTTACT
TGCTGAAAACGACTTAAAACAATCTCATCTAGCGGACAGGTTAGAAATCCCAAGAAGTAGTTTTAATGAATATGTAAAAG
GAACAGCTTTACCAAGACCTGGTAACGTCCAAAAAATCGCAGATTATTTTGGATTGAAGAAATCGAATATAGACCCACGG
TTTAAATCCACAATCCCTTCTGCCACCCCTAAAACCGTTTCTGACGACGTTTTGAGGTTGGATAGGGATTTACATTCAAA
CAATCACAAAAGCTGGATACGGTATGGAAATGAGCTTCTAGATAAACAAAATACAGTAAACGAACCTCAAGCAGTCTACT
TCACCTACAACTATTACGACCAACCCGCTTCCGCTGGCACAGGTCAATATCTGAATGATGTGAAGGTCGAGACTATCGAA
TTACCTATTGAAGTGGACGCTGACTTCGTTGTACCCATTTACGGAGACTCCATGGAACCAGAATACCACTCAGGCGATTA
TGTATTCGTCAAGCTATCTGTGGATCTATCTGACGGCGACATCGGAGTATTTGCCTATAACGGCGACGCCTACATCAAAC
AACTCCGCATCACAGACCAAGGCGCCTATCTTCACAGCCTGAACCCAGACTACGACAACATCCCAATCACAGCAGACACC
GACTTCCGAACCATTGGCGAGGTTGTGGAAGTGTATAGGGAGAGGTAG

Domains

Predicted by InterProScan.

• Helix-turn-helix (HTH_3) (24-72)

• Peptidase S24-like (Peptidase_S24) (142-249)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
irvR	Streptococcus mutans UA159	37.627	100	0.435