Detailed information NTG0408650

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: GPY41_RS19720
• Genome accession: NZ_CP046835
• Coordinates: 2514783..2515790 (+)
• Length: 335 a.a.
• NCBI ID: WP_011079334.1
• Uniprot ID: -
• Organism: Vibrio vulnificus strain 07-2444
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2509783..2520790

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GPY41_RS19700	metJ	2509888..2510205 (+)	318	WP_011079338.1	met regulon transcriptional regulator MetJ	-
GPY41_RS19705	-	2510292..2511569 (-)	1278	WP_011079337.1	malic enzyme-like NAD(P)-binding protein	-
GPY41_RS19710	rpmE	2511848..2512069 (-)	222	WP_011079336.1	50S ribosomal protein L31	-
GPY41_RS19715	priA	2512350..2514554 (+)	2205	WP_158123889.1	primosomal protein N'	-
GPY41_RS19720	cytR	2514783..2515790 (+)	1008	WP_011079334.1	DNA-binding transcriptional regulator CytR	Regulator
GPY41_RS19725	-	2515898..2516455 (+)	558	WP_017419640.1	SPOR domain-containing protein	-
GPY41_RS19730	hslV	2516605..2517159 (+)	555	WP_017419639.1	ATP-dependent protease subunit HslV	-
GPY41_RS19735	hslU	2517187..2518518 (+)	1332	WP_011079331.1	HslU--HslV peptidase ATPase subunit	-
GPY41_RS19740	-	2518684..2519601 (+)	918	WP_017419638.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
GPY41_RS19745	rraA	2519677..2520198 (+)	522	WP_011079329.1	ribonuclease E activity regulator RraA	-
GPY41_RS19750	zapB	2520420..2520662 (+)	243	WP_011079328.1	cell division protein ZapB	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36842.38 Da
• Isoelectric Point: 6.4904

>NTDB_id=408650 GPY41_RS19720 WP_011079334.1 2514783..2515790(+) (cytR) [Vibrio vulnificus strain 07-2444]
MATMKDVAQLAGVSTATVSRALMNPDKVSATTRKRVEDAVLEAGYSPNSLARNLRRNESRTIVAIVPDICDPYYTEIIRG
IEDAAIEQGYLVLLGDSGQQKRRESSLVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPDLELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPKSAALCQFRQQGYQQALRRAGITMNPQYCVESEFSFEGGAKAIRHLLEMNDAPTA
VFCHCDTMAIGAIQEAKKLGFRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDIHSGSRLLE
TKLVVRGSAAPPGLR

Nucleotide

• Length: 1008 bp

>NTDB_id=408650 GPY41_RS19720 WP_011079334.1 2514783..2515790(+) (cytR) [Vibrio vulnificus strain 07-2444]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGAGTTTCAACGGCAACGGTTTCGAGAGCGCTGATGAATCCAGACAA
AGTATCCGCCACAACGCGTAAGCGTGTGGAAGATGCGGTGTTGGAAGCTGGTTATTCCCCAAATTCGCTGGCACGCAATT
TACGCCGCAACGAGTCACGCACTATCGTCGCGATCGTTCCTGACATTTGTGATCCTTACTACACAGAGATCATTCGTGGC
ATTGAAGATGCCGCCATTGAGCAGGGATATTTGGTTCTACTCGGTGACAGCGGCCAACAAAAGCGCCGTGAAAGCTCACT
CGTCAATCTCGTTTTTACCAAGCAAGCGGATGGTATGCTACTGCTTGGTACTGACTTACCTTTTGATGTGAGCAAGCCAG
AACAGAAAAATCTTCCTCCGATGGTCATGGCTTGCGAGTTCGCCCCCGACCTCGAACTGCCGACGGTTCATATCGATAAC
TTGACCTCAGCATTTGAAGCGGTGAACTACCTGACCCAATTGGGCCACAAACGCATCGCCCAAATTTCAGGGCCAAAATC
CGCAGCACTTTGTCAGTTTAGACAACAAGGCTATCAACAAGCTTTGCGCCGTGCAGGCATCACAATGAACCCACAATACT
GTGTTGAGTCTGAGTTCTCTTTTGAAGGTGGGGCGAAAGCGATCCGTCATCTGCTAGAAATGAATGACGCGCCAACCGCC
GTTTTCTGCCATTGTGACACCATGGCTATCGGGGCGATTCAAGAAGCGAAAAAATTGGGCTTCCGAGTACCGCAAGATCT
GTCGATTGTCGGCTTCGATGACATTCAGTTTGCCCAATATTGCGATCCTCCGCTAACCACCATCTCACAGCCACGCTATG
AGATTGGTCGTCAAGCGATGCTGATGATGTTAGAGCTGCTGAAAGGACATGACATTCACAGTGGCTCACGCTTACTTGAA
ACCAAATTGGTGGTTCGTGGTAGCGCAGCGCCTCCGGGCTTACGCTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	89.759	99.104	0.89
cytR	Vibrio cholerae C6706	88.253	99.104	0.875