Detailed information NTG0408630

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: GPY41_RS18200
• Genome accession: NZ_CP046835
• Coordinates: 2190711..2194100 (+)
• Length: 1129 a.a.
• NCBI ID: WP_158123801.1
• Uniprot ID: -
• Organism: Vibrio vulnificus strain 07-2444
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2185711..2199100

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GPY41_RS18180	erpA	2186111..2186452 (-)	342	WP_026130638.1	iron-sulfur cluster insertion protein ErpA	-
GPY41_RS18185	hemL	2186739..2188034 (+)	1296	WP_158123800.1	glutamate-1-semialdehyde 2,1-aminomutase	-
GPY41_RS18190	-	2188284..2189369 (+)	1086	WP_011151094.1	AI-2E family transporter	-
GPY41_RS18195	rsmC	2189443..2190464 (+)	1022	Protein_1948	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
GPY41_RS18200	chiS	2190711..2194100 (+)	3390	WP_158123801.1	response regulator	Regulator
GPY41_RS18205	-	2195041..2196714 (+)	1674	WP_045618650.1	ABC transporter substrate-binding protein	-
GPY41_RS18210	-	2196883..2197869 (+)	987	WP_011079592.1	ABC transporter permease	-
GPY41_RS18215	-	2197872..2198897 (+)	1026	WP_011079591.1	ABC transporter permease	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 127477.45 Da
• Isoelectric Point: 5.8920

>NTDB_id=408630 GPY41_RS18200 WP_158123801.1 2190711..2194100(+) (chiS) [Vibrio vulnificus strain 07-2444]
MFKFYRKQKFKRLQSTLMTAFLVLSITPLTITAIFFLQSHSKDLQEQSTSHLLSVRDTKQQQILDYFQAQETEVMGFVRS
ELAYASGGRFYGLVNAFKSLGVDMEQARENAQQRYIQGSGDQIKTSILPESSSYVGSERYRLLHKRYHWAYLELLKRSDF
DDILLVDLDGNVTYSIYKNENFGTNLIEGPFKESMLGKSFRQLANDVSEKRKQNEDYTPVYISDFSVEDGKQVAWLGAPI
IQQGYLHSYAMFRLPNNGITKLIADINKDAAIHTLLVGSDHLPRTMTTKQTDIESSIEVVDKALAGLTDVGTYINSSGEA
TIAAYAPISFKGQTWALVVQLPEKEAFARIHQLEKLFVIAMLIAIVLVFISSHYLSNFITSPLLKLTWAAERVSAGDLDE
NMINTERKDEIGRLAISFERMQRSIRDKIQLIKTQNAELEKNLQLIQKQNDELQLADKLKDEFLATTSHELRTPLHGMIG
IAETLISGANGPLPSNQRYQLDIIIKSGQRLATLVDDLLDYHKMRYGSLDIQKSAVNLASATRLVLELSHHLLGNKTLRI
INQVSNDVAPVSADPQRLEQVLYNLIGNAIKYTTEGKIVISANVVDDKVRVQVVDTGQGIPAEQLEHIFEPLIQAGRDSG
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLASADEISATEVMQNQHHFQAPDSNELISLDNSSLPENP
NGPLLIVADDEPVNLRVLESFLRIEGYRVQTASDGPETLELIEHEKPALLLLDIMMPGMSGYQVCHQLRQQFDMAELPII
MLTALSQSEDRVRGFEAGANDYLTKPFNKQELAARIKAHLMASKAEARRLENNRLEAELRQRAMVEASLLETQGRLLEQL
ESAPEAIICIREDKRIRFANDAACKLFKRSLEQLKRSNAEELIAPKYLTVKQQHYCGNIDIYVDDVRQHIETDILKLPEG
SGLDAMFIFNVGGGAAASRVHNLETAVEVLSSYAFDGDKERLQSLKELGGEFTRLADKALGTNKNKQELMREVLVDLMTH
ALDYWESVTGENKFTFAEQSGLWRVYLDRSTLQTRTLDKYMRIETLPKTPRWRTVLSSIEYILDHCKEQSPERTYIEMQR
DKLQRLLTS

Nucleotide

• Length: 3390 bp

>NTDB_id=408630 GPY41_RS18200 WP_158123801.1 2190711..2194100(+) (chiS) [Vibrio vulnificus strain 07-2444]
ATGTTTAAGTTTTATCGCAAACAGAAGTTTAAACGCCTTCAAAGCACTCTGATGACTGCGTTTTTGGTGCTGAGTATCAC
GCCATTAACCATCACAGCGATTTTCTTTTTGCAATCACACAGTAAAGATCTCCAAGAGCAAAGCACTTCTCACCTGCTTT
CTGTTCGAGACACCAAGCAGCAACAGATCCTAGATTATTTCCAAGCACAAGAAACGGAAGTGATGGGATTTGTTCGTTCA
GAGTTAGCTTACGCGAGTGGTGGCCGATTTTACGGGCTTGTCAACGCTTTCAAAAGCTTAGGCGTGGATATGGAACAGGC
TAGAGAAAACGCTCAGCAGCGCTATATTCAGGGATCTGGCGATCAAATAAAAACGTCGATTTTGCCGGAATCCAGCTCTT
ATGTCGGTAGTGAACGTTACCGTTTGCTGCATAAGCGCTATCACTGGGCCTATTTGGAGCTTTTGAAGCGATCCGATTTT
GACGATATTTTGTTGGTGGATCTCGATGGCAACGTCACCTACTCCATCTACAAAAATGAAAACTTTGGCACAAACTTAAT
TGAGGGGCCTTTTAAAGAGAGCATGCTCGGCAAAAGTTTCCGTCAATTGGCTAATGACGTCAGCGAAAAACGCAAGCAAA
ACGAAGACTATACCCCCGTCTATATTTCCGACTTCTCGGTTGAAGATGGCAAACAAGTCGCTTGGTTGGGCGCACCGATC
ATCCAGCAAGGCTATCTGCACAGCTACGCCATGTTCAGGCTACCCAACAATGGCATCACCAAACTGATTGCAGACATCAA
TAAAGATGCGGCTATCCACACTTTGCTGGTTGGAAGTGACCACTTACCTCGCACTATGACCACAAAGCAAACCGATATCG
AAAGCAGTATTGAAGTGGTCGATAAGGCACTCGCGGGACTGACGGATGTCGGGACTTACATCAACAGCAGCGGAGAGGCG
ACCATCGCCGCCTATGCGCCAATTTCATTCAAAGGTCAAACCTGGGCTTTAGTGGTTCAGTTGCCGGAGAAAGAAGCGTT
TGCACGCATTCATCAGTTAGAAAAACTGTTCGTCATCGCCATGTTGATTGCGATCGTGCTGGTGTTTATCTCATCTCACT
ACTTATCGAATTTCATCACCTCACCACTACTCAAACTCACTTGGGCTGCAGAGCGCGTTTCTGCTGGTGATCTCGATGAA
AACATGATTAATACAGAGCGCAAAGACGAAATAGGCCGTTTAGCAATCAGTTTTGAACGAATGCAACGCTCGATTCGCGA
TAAAATTCAGCTTATTAAAACGCAAAATGCGGAGCTAGAGAAAAATCTACAGCTGATTCAAAAGCAAAACGACGAATTGC
AATTGGCCGATAAGCTCAAAGATGAATTTTTGGCAACTACCTCTCATGAGCTACGCACTCCACTGCATGGCATGATTGGT
ATTGCAGAAACCCTAATCTCAGGGGCAAACGGCCCACTGCCCTCTAACCAGCGCTATCAACTGGACATCATTATTAAGAG
TGGCCAGCGCTTAGCTACGCTTGTGGATGACTTGCTCGACTACCACAAAATGCGCTATGGCAGTTTGGATATTCAAAAAT
CCGCCGTCAATTTGGCCAGTGCGACTCGACTGGTATTGGAGCTGTCTCACCACTTATTGGGCAACAAAACTCTGCGCATC
ATTAATCAGGTTTCTAACGATGTTGCGCCGGTATCTGCCGATCCACAGCGATTAGAACAGGTGCTGTATAACCTTATTGG
CAACGCGATCAAATACACCACTGAAGGTAAAATCGTCATTTCCGCCAATGTGGTTGACGATAAAGTTCGAGTGCAAGTCG
TCGATACCGGCCAAGGCATTCCAGCAGAACAATTAGAGCATATTTTCGAACCGCTCATTCAAGCTGGTCGAGACTCTGGT
CGTTATCGCCAAGGTGCAGGTCTGGGGCTTTCCATTAGCCGTCAGCTGATCGAGTTAATGGGAGGATCGCTCTACGTCAG
CAGTCAACCTATGGTTGGCACCACCTTTAGCTTCACCTTGCCGTTGGCCAGCGCAGACGAAATCAGCGCCACGGAAGTCA
TGCAAAATCAACATCACTTCCAAGCACCAGATAGCAATGAATTGATCTCATTAGATAATTCCTCACTGCCAGAGAATCCC
AATGGCCCGCTACTCATTGTGGCCGATGATGAACCCGTCAACTTACGGGTGCTTGAAAGTTTCCTACGCATCGAAGGGTA
CCGAGTGCAAACGGCCTCAGATGGCCCAGAAACACTCGAACTCATTGAACATGAAAAACCCGCCTTGCTGTTGCTCGACA
TCATGATGCCGGGTATGAGCGGTTATCAAGTTTGCCATCAACTCCGACAGCAATTCGACATGGCAGAGTTGCCTATTATC
ATGCTAACAGCGTTGAGTCAGAGCGAAGATCGCGTGCGAGGATTCGAAGCTGGGGCCAATGATTACTTAACCAAACCATT
TAATAAGCAAGAGCTTGCGGCCCGAATCAAAGCACATTTAATGGCAAGTAAAGCAGAAGCTCGTCGCTTGGAAAACAATC
GCCTTGAAGCGGAGCTTCGCCAACGTGCAATGGTGGAAGCGAGCTTACTGGAAACACAAGGGCGTTTATTAGAACAATTG
GAGTCGGCCCCAGAAGCCATCATCTGTATTCGTGAAGATAAGCGTATTCGCTTTGCCAATGACGCGGCCTGTAAACTGTT
CAAACGCAGCTTAGAGCAGCTCAAGCGATCAAACGCAGAAGAACTTATTGCTCCCAAATATTTAACCGTCAAACAGCAGC
ATTATTGCGGCAATATCGATATCTATGTCGACGATGTTCGACAGCATATTGAAACGGACATCCTTAAATTACCAGAAGGG
TCTGGCCTTGATGCCATGTTTATCTTTAATGTCGGGGGTGGCGCTGCTGCTTCTCGTGTGCACAACCTAGAAACCGCCGT
GGAAGTCCTTTCAAGCTATGCCTTTGATGGTGACAAAGAGCGCTTACAGAGCCTCAAAGAGCTAGGGGGAGAATTTACTC
GCCTGGCCGACAAAGCGCTGGGTACCAATAAGAATAAGCAAGAGCTGATGCGTGAAGTCCTTGTGGATTTGATGACGCAT
GCACTCGATTATTGGGAGTCAGTGACAGGTGAAAACAAGTTTACCTTTGCTGAACAAAGTGGTTTATGGCGCGTTTATCT
CGACCGCAGCACGCTACAAACTCGCACACTTGATAAATACATGCGAATTGAAACCTTGCCAAAAACGCCGCGTTGGAGAA
CCGTGTTGAGTTCTATTGAGTACATTCTGGACCACTGTAAAGAGCAAAGTCCTGAGCGTACTTACATTGAGATGCAGCGA
GATAAATTACAACGCCTGCTCACCAGCTAA

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (375-427)

• PAS fold (PAS) (877-926)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• Response regulator receiver domain (Response_reg) (726-837)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	77.148	100	0.771