Detailed information NTG0408513

Bioinformatically predicted

Overview

• Name: rpoN/rpoN1
• Type: Machinery gene
• Locus tag: H0S59_RS03325
• Genome accession: NZ_CP059078
• Coordinates: 708133..709581 (+)
• Length: 482 a.a.
• NCBI ID: WP_002050391.1
• Uniprot ID: A0AA36NX19
• Organism: Acinetobacter nosocomialis strain WM98B
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 703133..714581

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H0S59_RS03325 (H0S59_03325)	rpoN/rpoN1	708133..709581 (+)	1449	WP_002050391.1	RNA polymerase factor sigma-54	Machinery gene
H0S59_RS03330 (H0S59_03330)	hpf	709751..710089 (+)	339	WP_001167461.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
H0S59_RS03335 (H0S59_03335)	ibaG	710228..710479 (+)	252	WP_002050455.1	BolA family iron metabolism protein IbaG	-
H0S59_RS03340 (H0S59_03340)	murA	710486..711742 (+)	1257	WP_006581686.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
H0S59_RS03345 (H0S59_03345)	hisG	711742..712425 (+)	684	WP_002050281.1	ATP phosphoribosyltransferase	-
H0S59_RS03350 (H0S59_03350)	hisD	712531..713820 (+)	1290	WP_033846787.1	histidinol dehydrogenase	-

Sequence

Protein

• Length: 482 a.a.
• Molecular weight: 55009.99 Da
• Isoelectric Point: 4.6513

>NTDB_id=408513 H0S59_RS03325 WP_002050391.1 708133..709581(+) (rpoN/rpoN1) [Acinetobacter nosocomialis strain WM98B]
MKLSVGLKVANSLSLTPQLQQAIRLLQLSSLELEQEIQIQLDSNPLLEKVEDESIAESLSTLEKKEADDLTTELNANHLP
DDLPVDTEWDDIYTHQSTALATPEFEEREDNRQVQMTLKEHMLEQVNLLHFSKIDQLIAYCIVDALDDKGFLDAEIEEII
LAVQHLLNDMDIEEDVEEDEVLVVLKHIQRLDPIGIGARNLAECLKVQLEFLPKETEYLKEAKNLLQYYELLIANDLNKL
LKQTGLSKDQLKFAVDLLKTLKPYPGMDFEKQESEYQIPDVVVAKKDLHWQVQLNPDVMPKLRINSFYSSMIRRADQSDD
NLYLRNQMLEAKNFIKSIDERHKTLLKVATCIVEHQKAFLEIGPEAMKPLVLRDVAEEVELHESTVSRVTTNKYMLTPRG
LFELKYFFSSHVGTTAGGEASSTAIRAMIKKLVSNENPRKPLSDNAIAALLKDEGIEVARRTVAKYRESLHIPSSSERKV
LI

Nucleotide

• Length: 1449 bp

>NTDB_id=408513 H0S59_RS03325 WP_002050391.1 708133..709581(+) (rpoN/rpoN1) [Acinetobacter nosocomialis strain WM98B]
ATGAAATTATCTGTTGGATTGAAAGTTGCGAACTCTTTATCGTTAACACCTCAATTGCAGCAGGCAATCCGTTTACTGCA
GCTCTCAAGCTTAGAATTAGAGCAAGAAATTCAAATTCAATTAGATAGTAATCCATTACTTGAAAAAGTGGAAGATGAAT
CAATAGCAGAAAGTTTATCCACTTTAGAAAAAAAAGAGGCGGATGATCTTACTACAGAGTTAAATGCAAACCATTTACCT
GATGATTTACCTGTCGATACTGAGTGGGATGACATTTATACCCATCAGTCTACAGCTCTGGCTACACCTGAATTTGAAGA
GCGTGAGGATAATCGTCAAGTTCAGATGACACTTAAAGAGCATATGTTAGAACAAGTCAATTTATTGCATTTTTCAAAAA
TAGATCAGTTGATTGCTTATTGTATTGTGGATGCCTTAGATGATAAGGGATTTTTAGATGCTGAGATAGAAGAGATAATC
TTAGCTGTACAACATCTATTAAATGATATGGATATTGAGGAAGATGTTGAGGAAGATGAAGTTTTAGTTGTTCTAAAGCA
TATACAACGGCTTGATCCAATTGGCATTGGTGCTCGTAATCTTGCCGAATGTTTAAAAGTTCAGTTAGAGTTTTTGCCTA
AAGAAACTGAATATCTAAAAGAAGCTAAAAATCTACTTCAATATTATGAATTATTGATTGCGAACGATCTCAATAAATTA
TTAAAACAAACAGGTCTTTCTAAAGATCAGTTAAAGTTTGCAGTTGATTTGCTAAAAACACTAAAGCCTTACCCAGGTAT
GGATTTTGAAAAGCAAGAATCAGAATATCAAATTCCTGATGTAGTAGTTGCTAAGAAGGATTTACATTGGCAAGTTCAGT
TAAATCCTGATGTGATGCCAAAACTAAGAATTAATTCTTTTTATTCGAGTATGATTCGTAGGGCAGATCAGAGTGATGAT
AATTTATATCTACGTAATCAGATGCTTGAAGCTAAGAATTTTATAAAGAGCATTGATGAACGCCATAAAACTTTATTAAA
AGTTGCGACTTGTATTGTTGAGCATCAAAAAGCATTTCTTGAAATAGGTCCTGAAGCAATGAAACCGTTGGTACTACGGG
ACGTTGCTGAGGAAGTGGAATTACATGAGTCTACAGTTTCTCGGGTTACAACAAATAAATATATGCTAACACCACGTGGA
CTTTTTGAGTTGAAATACTTCTTTTCTAGTCACGTGGGAACAACAGCAGGCGGGGAGGCTTCCTCTACCGCCATTCGAGC
TATGATTAAAAAGTTGGTATCCAATGAAAATCCACGTAAACCATTGTCTGATAATGCAATTGCTGCTTTGTTAAAAGATG
AAGGGATAGAAGTGGCTAGAAGGACTGTAGCAAAATATCGAGAATCGTTACATATTCCATCGTCATCCGAAAGAAAAGTC
TTGATCTAG

Domains

Predicted by InterProScan.

• Sigma-54, DNA binding domain (Sigma54_DBD) (323-479)

• Sigma-54 factor, Activator interacting domain (AID) (Sigma54_AID) (7-48)

• Sigma-54 factor, core binding domain (Sigma54_CBD) (110-308)

3D structure

• AlphaFold DB: A0AA36NX19

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rpoN/rpoN1	Ralstonia pseudosolanacearum GMI1000	42.885	100	0.456