Detailed information NTG0408436

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: HZ322_RS05625
• Genome accession: NZ_CP059049
• Coordinates: 1188697..1189767 (-)
• Length: 356 a.a.
• NCBI ID: WP_003131037.1
• Uniprot ID: Q9CG78
• Organism: Lactococcus lactis strain N8
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1183697..1194767

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HZ322_RS05610 (HZ322_05610)	dprA	1183995..1184843 (+)	849	WP_012897825.1	DNA-processing protein DprA	Machinery gene
HZ322_RS05615 (HZ322_05615)	topA	1185105..1187237 (+)	2133	WP_017864498.1	type I DNA topoisomerase	-
HZ322_RS05620 (HZ322_05620)	trmFO	1187309..1188652 (+)	1344	WP_017864499.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
HZ322_RS05625 (HZ322_05625)	xerS	1188697..1189767 (-)	1071	WP_003131037.1	tyrosine recombinase XerS	Machinery gene
HZ322_RS05630 (HZ322_05630)	-	1190252..1190539 (-)	288	WP_017864500.1	hypothetical protein	-
HZ322_RS05635 (HZ322_05635)	xerS	1190623..1191678 (-)	1056	WP_017864501.1	tyrosine recombinase XerS	Machinery gene
HZ322_RS05640 (HZ322_05640)	-	1192459..1192968 (+)	510	WP_017864502.1	hypothetical protein	-
HZ322_RS05645 (HZ322_05645)	-	1193083..1193430 (-)	348	WP_017864503.1	helix-turn-helix transcriptional regulator	-
HZ322_RS05650 (HZ322_05650)	-	1193748..1193945 (+)	198	WP_017864504.1	hypothetical protein	-
HZ322_RS05655 (HZ322_05655)	-	1194033..1194305 (-)	273	WP_306471740.1	hypothetical protein	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41397.21 Da
• Isoelectric Point: 9.6568

>NTDB_id=408436 HZ322_RS05625 WP_003131037.1 1188697..1189767(-) (xerS) [Lactococcus lactis strain N8]
MKREQLIQNIEKLKHIMPSYVLEYYQSKLTIPYSLNTLYEYLKEYERFFSWLVDSGVADVDKITDVSLSVLENLTKRDLE
SFILYLRERPRLNTRSTRYGVSQTTINRTLSALSSLYKYLTEEVENEDGEPYFYRNVMKKVQTKKKSETLASRAENIKGK
LFLGDETQGFLDYIDNEYEKTLSNRARSSFFKNKERDLAIIALILASGIRLSEAVNVDLRDLNLITMVVEVTRKGGKRDA
VPYAPFAKTYFERYLEVRSQRYKTTAKDTAFFVTLYRDVPSRIDPSSVEKLVAKYSQAFKVRVTPHKLRHTLATRLYAQT
NSQVLVSNQLGHASTQVTDLYTHIINEEQKNALDNL

Nucleotide

• Length: 1071 bp

>NTDB_id=408436 HZ322_RS05625 WP_003131037.1 1188697..1189767(-) (xerS) [Lactococcus lactis strain N8]
ATGAAACGTGAACAATTAATACAAAATATTGAAAAACTAAAACATATCATGCCTTCTTATGTTTTAGAATATTATCAATC
TAAACTTACTATTCCTTATAGTTTGAATACACTTTATGAATATCTTAAAGAATATGAACGTTTCTTTAGTTGGTTGGTCG
ATTCTGGAGTTGCTGATGTTGATAAGATAACTGATGTTTCCCTCTCTGTTTTAGAAAACTTAACTAAACGAGATTTGGAG
TCATTTATCCTCTATCTTAGGGAGAGACCCCGTTTAAATACGCGCTCTACTCGTTATGGGGTAAGTCAAACAACAATTAA
TCGTACTCTATCTGCTCTTTCTAGTCTTTATAAATACCTTACTGAAGAGGTTGAAAATGAAGATGGTGAGCCTTACTTCT
ATCGTAATGTTATGAAGAAGGTACAGACTAAGAAAAAATCCGAAACTTTAGCTTCTCGTGCTGAGAATATTAAAGGGAAG
CTTTTTTTGGGAGATGAAACTCAAGGTTTTCTTGACTATATTGATAATGAATATGAAAAAACATTATCAAATAGAGCTCG
TTCTAGTTTTTTCAAAAATAAAGAACGTGATTTAGCAATTATTGCACTTATTTTAGCCTCTGGTATTCGTCTTTCTGAGG
CAGTTAATGTAGATTTAAGAGATTTAAATCTTATTACTATGGTTGTTGAGGTGACTCGTAAAGGAGGAAAAAGGGATGCT
GTTCCTTATGCTCCTTTTGCCAAAACTTATTTTGAAAGATACTTGGAAGTACGAAGTCAACGTTATAAGACTACAGCGAA
AGATACGGCATTTTTTGTGACACTTTATAGAGATGTTCCTAGCCGAATAGATCCTTCTAGTGTTGAAAAATTAGTTGCTA
AATATTCTCAAGCTTTTAAAGTGCGAGTGACCCCTCACAAGCTTAGACATACACTTGCGACTCGACTTTATGCTCAAACA
AATTCTCAGGTATTGGTGAGCAATCAGTTAGGGCATGCTTCAACTCAAGTTACAGACCTTTATACTCATATTATCAATGA
AGAACAAAAAAATGCTCTAGATAATCTATAA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (182-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

3D structure

• AlphaFold DB: Q9CG78

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	76.685	100	0.767