Detailed information NTG0408380

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: GPY06_RS15050
• Genome accession: NZ_CP046820
• Coordinates: 1992496..1996029 (-)
• Length: 1177 a.a.
• NCBI ID: WP_170937967.1
• Uniprot ID: -
• Organism: Vibrio metoecus strain 2011V-1015
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1987496..2001029

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GPY06_RS15035	-	1987958..1988983 (-)	1026	WP_055051740.1	ABC transporter permease	-
GPY06_RS15040	-	1988986..1989972 (-)	987	WP_158120337.1	ABC transporter permease	-
GPY06_RS15045	-	1990142..1991812 (-)	1671	WP_158120338.1	ABC transporter substrate-binding protein	-
GPY06_RS15050	chiS	1992496..1996029 (-)	3534	WP_170937967.1	two-component system sensor histidine kinase ChiS	Regulator
GPY06_RS15055	rsmC	1996093..1997115 (-)	1023	WP_055029691.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
GPY06_RS15060	-	1997188..1998273 (-)	1086	WP_055031728.1	AI-2E family transporter	-
GPY06_RS15065	hemL	1998527..1999825 (-)	1299	WP_000167251.1	glutamate-1-semialdehyde 2,1-aminomutase	-
GPY06_RS15070	erpA	2000109..2000450 (+)	342	WP_000005744.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1177 a.a.
• Molecular weight: 132953.18 Da
• Isoelectric Point: 6.6938

>NTDB_id=408380 GPY06_RS15050 WP_170937967.1 1992496..1996029(-) (chiS) [Vibrio metoecus strain 2011V-1015]
MRLCPRFSLDLLVKVKKLVNFVTLGFSCHSPAHGSRAPTSITKSNALIMFRFYRKQKFKRLQNTLMAAFLALSIIPLTIT
ALFFLHSHSKDLEEQSTSYLVSVRDTKQQQVIDYMMAKESEVMGFVRSELAYASGGRFYGLVNAFQRLDVSIEAAREHAQ
QRYIPGSGDQIKTSVLPQSSSYVGSERYRLLHKRYHWAFLELLKRSDFDDILLVDIEGNVVYSIYKYDNFGTNLLTGKYQ
DANLGHTFKRLEQTVNEQRKTNEDFTPVVISDFVEEDGKQYAWLGAPIIQQGYLHSYAMFRLPSNAITKLIADGNNNPSM
QTILVGQDLRSRTLTSAEIAVEKSKQVVELALSGKRSVGTYTNTDGEQVIAAYAPINLKSIHWALVVELPEKEAFARVRQ
LEKLFVFAMLTAIVLVVIASHYLSNFITAPLLKLTWAAERVSAGDLDEAMINTERKDEIGRLAVSFERMQRSIREKISLI
KSQNKELESNLLIIRKQNDELQLANKLKDEFLATTSHELRTPLHGMIGIAEALVSGANGPLTAAHKYQLDIIISSGQRLA
TLVDDLLDYHKMRYGALDIQKGAVDLSSATRLVLELSHHLLGKKTLRIINQVPELPVWVSADPQRLEQVLYNLIGNAIKY
TSEGKIVISATYMDDKIRVQVVDTGQGIPAEQLEQIFEPLIQAGRDASRYRQGAGLGLSISRQLIELMNGTLYVSSQPMV
GTTFSFTLPLATQDEIAQARLTELPHFQAPEILDAELPEQSTLPENEHGPLLLVADDEPVNLRVLDSFLRLEGYRVHTVQ
DGHEVLEAVKREKPELLLLDIMMPGMSGYQVCEKLRQSYDHAELPIIMLTALNQSDDRVRGFEAGANDYLSKPFNKQELA
ARIVAHLTASKAELRRVENAQLQKELKHRAMVEASLLETQGRLLEQLESAPEAILCVKEGNKIRFANEAASRLFRRTPEQ
LKRSNAEELIAPKYLNIDQEHYCGNIDVYVDDVRQHLSADVLRLPEGSGLQAMYIFNVGGSINAARIYNLETAVEALSSY
AFEGDKDKLQQLKELGGEFTRLADKASGEYQSKQDLMRSVLVEAMTSALDYWERVSGQSKFTFAEQSGLWRVYLDRSTLQ
TRTLDKYLRIETLPKTPRWRTVLNSLDYILEHCKESSPDRTHIEMQRDKLQKLLTSE

Nucleotide

• Length: 3534 bp

>NTDB_id=408380 GPY06_RS15050 WP_170937967.1 1992496..1996029(-) (chiS) [Vibrio metoecus strain 2011V-1015]
TTGCGCCTATGCCCACGCTTTAGCTTGGACTTACTTGTCAAAGTAAAAAAACTCGTTAATTTCGTTACTTTAGGTTTTTC
TTGTCATTCACCCGCTCATGGCTCGCGAGCGCCAACGAGTATCACCAAAAGTAACGCCTTAATTATGTTTAGGTTCTATC
GAAAACAAAAATTCAAGCGCCTGCAGAATACCCTGATGGCGGCCTTTTTGGCTCTTAGCATTATTCCATTGACGATTACC
GCGCTGTTTTTCCTCCATTCCCACAGTAAAGACTTGGAAGAGCAAAGCACCTCATACCTCGTTTCGGTACGAGATACCAA
GCAGCAGCAAGTGATCGATTACATGATGGCCAAAGAGTCAGAAGTCATGGGCTTTGTCCGTTCCGAGCTTGCTTATGCCA
GTGGCGGACGTTTTTATGGTTTAGTCAATGCATTCCAACGCTTGGATGTCAGTATCGAAGCGGCTCGTGAACATGCCCAG
CAGCGTTACATCCCCGGTTCTGGCGATCAAATAAAAACGTCAGTGCTGCCACAATCCAGCAGTTATGTGGGAAGCGAACG
TTACCGGTTACTACACAAACGCTATCACTGGGCCTTTTTAGAACTGCTAAAACGCTCAGATTTCGATGACATTCTCTTAG
TTGATATTGAAGGCAACGTCGTTTACTCCATTTATAAATACGACAACTTTGGCACCAATTTATTAACGGGCAAATATCAA
GACGCCAACCTAGGGCATACATTTAAACGTCTAGAACAAACGGTCAATGAACAACGCAAAACCAATGAAGACTTCACCCC
AGTGGTCATCTCAGATTTTGTCGAAGAAGACGGAAAACAGTACGCTTGGCTCGGCGCACCAATTATTCAACAAGGCTACT
TACACAGCTATGCCATGTTCCGCCTACCCAGTAATGCCATCACCAAACTGATCGCCGATGGCAACAATAATCCATCAATG
CAAACCATACTCGTCGGCCAAGATCTGCGTTCACGAACGTTAACGTCTGCAGAAATCGCCGTTGAAAAGAGCAAACAGGT
GGTCGAGCTCGCCTTGTCTGGCAAACGTTCGGTAGGTACCTATACCAATACCGATGGTGAACAAGTCATTGCTGCTTATG
CCCCTATCAATCTGAAAAGCATTCATTGGGCCTTAGTGGTTGAGCTTCCAGAAAAAGAAGCGTTTGCCCGTGTACGTCAA
TTGGAAAAGCTCTTTGTTTTTGCCATGTTGACTGCAATTGTATTGGTGGTGATAGCTTCGCATTATCTCTCGAACTTTAT
TACCGCCCCACTATTAAAACTCACTTGGGCCGCAGAACGTGTCTCTGCCGGAGATCTTGATGAGGCAATGATCAATACCG
AGCGGAAAGATGAAATTGGTCGTTTAGCCGTCAGTTTCGAGCGAATGCAGCGCTCTATCCGTGAAAAAATCTCACTCATC
AAATCACAAAATAAAGAGTTAGAGAGCAACCTGCTGATCATCCGTAAACAGAACGATGAATTGCAGCTCGCGAACAAGCT
CAAAGATGAATTCCTCGCCACCACATCACACGAATTGCGTACTCCACTACACGGTATGATTGGAATTGCCGAAGCATTAG
TTTCAGGTGCCAATGGCCCACTGACTGCCGCTCATAAATATCAACTCGATATCATTATTAGTAGTGGTCAGCGCTTAGCC
ACCTTGGTGGACGATTTGCTGGATTATCACAAAATGCGCTATGGCGCGTTGGATATTCAAAAAGGCGCCGTCGATTTATC
CAGTGCGACGCGGTTAGTGCTAGAGCTCTCGCATCACTTACTCGGCAAAAAAACACTGCGTATTATTAACCAAGTTCCAG
AGCTACCAGTCTGGGTTTCTGCGGATCCACAACGCTTGGAGCAAGTGCTGTATAACCTGATTGGTAATGCGATTAAATAT
ACGTCGGAAGGCAAGATTGTTATCTCCGCAACCTATATGGACGATAAAATCCGCGTACAGGTGGTGGATACTGGCCAAGG
TATTCCTGCCGAGCAACTGGAGCAAATATTCGAACCTCTGATCCAAGCAGGTCGTGATGCGAGCCGCTACCGTCAGGGCG
CGGGGTTAGGGTTGTCTATCAGCCGTCAGCTTATTGAGCTGATGAATGGTACACTTTATGTCAGCAGCCAGCCTATGGTT
GGCACGACATTTAGCTTTACTCTACCGCTAGCGACTCAAGATGAGATTGCTCAAGCACGCTTAACTGAACTGCCCCACTT
CCAAGCTCCAGAAATTTTGGATGCCGAACTTCCAGAGCAGAGCACGCTGCCTGAAAATGAGCACGGCCCATTACTTTTAG
TCGCTGATGATGAACCCGTTAATCTCAGAGTATTAGACAGCTTCTTACGTCTTGAAGGTTACCGTGTGCATACTGTACAA
GATGGTCATGAAGTGCTTGAAGCCGTGAAACGTGAAAAGCCTGAGCTCTTGTTACTCGATATCATGATGCCAGGCATGAG
CGGTTATCAAGTGTGTGAAAAACTGAGACAAAGTTACGACCATGCTGAGCTCCCCATCATTATGCTAACGGCCCTGAATC
AGTCCGATGACCGAGTGCGTGGTTTTGAAGCCGGTGCGAATGACTACTTATCGAAGCCATTTAACAAACAAGAGCTGGCG
GCTCGTATCGTAGCTCACCTTACCGCGAGCAAAGCAGAGTTGCGCCGTGTTGAAAATGCGCAGCTTCAAAAAGAGTTAAA
ACACCGTGCGATGGTTGAAGCGAGTCTCCTTGAAACTCAAGGACGCTTGTTAGAACAACTAGAATCCGCCCCAGAAGCGA
TACTGTGTGTCAAAGAAGGCAATAAAATACGCTTTGCCAACGAGGCCGCATCACGCCTATTTAGACGCACGCCAGAGCAG
CTTAAACGCTCGAATGCAGAAGAGTTAATCGCCCCCAAATACCTCAACATCGATCAAGAACATTACTGCGGCAATATTGA
TGTTTACGTTGATGATGTGCGCCAACATTTATCCGCTGACGTACTACGCTTACCGGAAGGATCCGGATTGCAAGCCATGT
ACATCTTTAATGTCGGAGGCAGTATTAATGCTGCACGTATTTATAATCTAGAAACCGCGGTAGAAGCCCTCTCAAGCTAC
GCTTTCGAAGGTGATAAAGATAAATTACAACAGCTCAAAGAGTTGGGTGGTGAGTTCACTCGCCTGGCCGATAAAGCATC
CGGTGAGTATCAATCCAAACAAGATTTGATGCGTAGTGTCTTGGTCGAAGCCATGACCAGCGCTCTTGATTATTGGGAGC
GAGTCTCAGGACAAAGTAAATTTACCTTTGCTGAACAAAGCGGCTTGTGGCGTGTGTATCTTGACCGCAGCACCTTACAA
ACTCGTACCTTAGATAAATATTTACGCATTGAGACATTGCCTAAAACACCACGCTGGAGAACGGTGCTTAACTCGCTCGA
TTACATCCTTGAGCACTGTAAAGAGTCAAGCCCAGATCGCACTCACATCGAGATGCAGCGCGATAAGCTACAGAAGTTAC
TCACCTCAGAATAG

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (508-573)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (622-731)

• Response regulator receiver domain (Response_reg) (773-883)

• HAMP domain (HAMP) (423-475)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	94.647	100	0.946