Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   DELCS14_RS24530 Genome accession   NC_015563
Coordinates   5582890..5583288 (-) Length   132 a.a.
NCBI ID   WP_012203501.1    Uniprot ID   A0A210VYJ7
Organism   Delftia sp. Cs1-4     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5577890..5588288
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DELCS14_RS24515 (DelCs14_4959) - 5579714..5581963 (-) 2250 WP_012203504.1 methyl-accepting chemotaxis protein -
  DELCS14_RS24520 (DelCs14_4960) - 5581982..5582509 (-) 528 WP_012203503.1 chemotaxis protein CheW -
  DELCS14_RS24525 (DelCs14_4961) - 5582525..5582890 (-) 366 WP_013804030.1 response regulator -
  DELCS14_RS24530 (DelCs14_4962) pilG 5582890..5583288 (-) 399 WP_012203501.1 response regulator Regulator
  DELCS14_RS30225 (DelCs14_4963) - 5583336..5583488 (-) 153 WP_013804031.1 rubredoxin -
  DELCS14_RS24535 (DelCs14_4964) - 5583604..5584560 (+) 957 WP_012203499.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  DELCS14_RS24540 (DelCs14_4965) hemL 5584639..5585937 (+) 1299 WP_013804032.1 glutamate-1-semialdehyde 2,1-aminomutase -
  DELCS14_RS24545 (DelCs14_4966) - 5586009..5586407 (-) 399 WP_013804033.1 hypothetical protein -
  DELCS14_RS24550 (DelCs14_4967) - 5586911..5587513 (-) 603 WP_013804034.1 DNA-3-methyladenine glycosylase I -
  DELCS14_RS24555 (DelCs14_4968) - 5587516..5588028 (-) 513 WP_013804035.1 c-type cytochrome -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14616.85 Da        Isoelectric Point: 6.9242

>NTDB_id=40832 DELCS14_RS24530 WP_012203501.1 5582890..5583288(-) (pilG) [Delftia sp. Cs1-4]
MTTSGAPLRVLVVDDSNTIRRSAEIFLKQGGHEVLLADDGFDALSKVNDYQPQLIFCDILMPKLDGYQTCAIIKRNARFS
DTPVVMLSSKDGVFDKARGRMVGCQDYLTKPFTKDQLLQAVEQFGKQTIGAL

Nucleotide


Download         Length: 399 bp        

>NTDB_id=40832 DELCS14_RS24530 WP_012203501.1 5582890..5583288(-) (pilG) [Delftia sp. Cs1-4]
GTGACGACATCGGGCGCACCCTTGCGCGTACTCGTGGTGGATGACAGCAATACCATCCGCCGCAGCGCAGAAATCTTCCT
CAAACAGGGCGGGCACGAAGTGCTCCTGGCCGACGACGGCTTCGACGCACTGTCCAAAGTCAACGACTATCAGCCCCAAC
TGATCTTCTGCGACATCCTCATGCCCAAGCTGGACGGCTACCAGACCTGCGCCATCATCAAGCGCAACGCGCGCTTCTCC
GATACGCCCGTGGTCATGCTCTCGTCCAAGGACGGCGTATTCGACAAGGCGCGCGGGCGCATGGTGGGCTGCCAGGACTA
CCTCACGAAACCCTTCACCAAAGACCAGCTGCTGCAGGCCGTGGAGCAGTTCGGCAAGCAAACCATAGGAGCACTTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A210VYJ7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

58.772

86.364

0.508

Multiple sequence alignment