Detailed information NTG0040831

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: DELCS14_RS23930
• Genome accession: NC_015563
• Coordinates: 5447871..5449091 (+)
• Length: 406 a.a.
• NCBI ID: WP_013803937.1
• Uniprot ID: A0A8I0ME26
• Organism: Delftia sp. Cs1-4
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5442871..5454091

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DELCS14_RS23910 (DelCs14_4837)	coaD	5443637..5444137 (-)	501	WP_013803934.1	pantetheine-phosphate adenylyltransferase	-
DELCS14_RS23915 (DelCs14_4838)	rsmD	5444269..5444979 (-)	711	WP_012203729.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
DELCS14_RS23920 (DelCs14_4839)	-	5444976..5446337 (-)	1362	WP_013803935.1	pitrilysin family protein	-
DELCS14_RS23925 (DelCs14_4840)	-	5446364..5447842 (-)	1479	WP_013803936.1	pitrilysin family protein	-
DELCS14_RS23930 (DelCs14_4841)	pilA	5447871..5449091 (+)	1221	WP_013803937.1	signal recognition particle-docking protein FtsY	Machinery gene
DELCS14_RS23935 (DelCs14_4842)	-	5449328..5450317 (+)	990	WP_013803938.1	tripartite tricarboxylate transporter substrate binding protein	-
DELCS14_RS23940 (DelCs14_4843)	cutA	5450304..5450702 (-)	399	WP_013803939.1	divalent-cation tolerance protein CutA	-
DELCS14_RS23945 (DelCs14_4844)	-	5450755..5451780 (-)	1026	WP_013803940.1	2-dehydropantoate 2-reductase	-
DELCS14_RS23950 (DelCs14_4845)	-	5451799..5452638 (-)	840	WP_267233498.1	class II aldolase/adducin family protein	-
DELCS14_RS23955 (DelCs14_4846)	-	5452631..5453164 (-)	534	WP_013803942.1	MarR family winged helix-turn-helix transcriptional regulator	-

Sequence

Protein

• Length: 406 a.a.
• Molecular weight: 42456.38 Da
• Isoelectric Point: 5.7832

>NTDB_id=40831 DELCS14_RS23930 WP_013803937.1 5447871..5449091(+) (pilA) [Delftia sp. Cs1-4]
MFSFFKKKPTPSAAEISPTDSSAAPEKAGIPATPPQDSPPALPPAAPAAPAADTGSAWWRKPFGGGKGDAAPPETPPAPA
AAPASTIAPADFIAAPEPTAKPEAEGASRQNWMQRLKTGLRKTGSSIATVFTGTQINDALYEELEDALLMADTGVKATEH
LLADLRRRVKEAKATDPAAVKALLADALADLLRPLEKPLVIGEHQPTVIMVAGVNGAGKTTSIGKLTRHLADEGQSVLLA
AADTFRAAAREQLGVWANRNTVEIVSQEGGDPAAVSFDAVTAGRARKKDVVLVDTAGRLPTQLHLMEELRKIRRVVSKAD
ATAPHEVLLVIDGNTGQNALAQVRAFDDALQLTGLIVTKLDGTAKGGVLAAIAQERPIPVYFIGVGEKVEDLETFNAREF
AQALLS

Nucleotide

• Length: 1221 bp

>NTDB_id=40831 DELCS14_RS23930 WP_013803937.1 5447871..5449091(+) (pilA) [Delftia sp. Cs1-4]
ATGTTCAGTTTTTTCAAGAAAAAGCCCACCCCCTCCGCCGCCGAGATTTCCCCGACGGACAGCAGCGCCGCGCCTGAAAA
GGCCGGCATTCCCGCAACCCCACCGCAGGACAGCCCCCCTGCCCTGCCACCGGCCGCGCCAGCGGCGCCGGCCGCCGACA
CCGGCAGTGCCTGGTGGCGCAAGCCCTTTGGCGGCGGCAAGGGCGATGCCGCGCCCCCCGAGACCCCGCCTGCCCCAGCT
GCTGCACCCGCGTCCACCATCGCGCCTGCGGACTTCATTGCCGCGCCCGAGCCCACGGCCAAGCCCGAGGCCGAAGGTGC
CAGCCGCCAGAACTGGATGCAGCGCCTCAAGACCGGCCTGCGCAAGACCGGCAGCAGCATTGCCACGGTCTTCACGGGCA
CGCAGATCAACGATGCGCTGTACGAGGAACTGGAAGACGCCCTGCTGATGGCCGACACCGGCGTCAAGGCCACCGAGCAC
CTGCTCGCCGACCTGCGCCGCCGCGTCAAGGAGGCCAAGGCCACCGACCCCGCCGCCGTCAAGGCGCTGCTGGCCGATGC
CCTGGCCGACCTGCTGCGCCCGCTGGAAAAGCCGCTGGTCATCGGCGAGCACCAGCCTACCGTGATCATGGTGGCTGGCG
TCAACGGCGCGGGCAAGACCACCTCCATCGGCAAGCTGACCCGTCACCTGGCCGACGAAGGCCAGAGCGTGCTGCTGGCC
GCCGCCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTTGGCGTCTGGGCCAACCGCAACACGGTGGAGATCGTCAGCCA
GGAAGGGGGCGATCCTGCGGCCGTGAGCTTTGACGCCGTCACCGCCGGCCGCGCGCGCAAGAAGGATGTGGTGTTGGTGG
ACACGGCAGGCCGCCTGCCCACCCAGCTGCACCTGATGGAAGAGCTGCGCAAGATCCGCCGCGTGGTCAGCAAGGCCGAC
GCCACGGCACCCCATGAGGTGCTGCTGGTCATCGACGGCAACACCGGCCAGAACGCGCTGGCCCAGGTGCGCGCCTTTGA
CGATGCGCTGCAGCTCACGGGCCTGATCGTCACCAAGCTTGACGGCACGGCCAAGGGCGGCGTGCTGGCCGCCATTGCCC
AGGAACGGCCGATCCCCGTGTACTTCATCGGCGTGGGCGAAAAGGTCGAGGACCTGGAAACCTTCAACGCCCGGGAATTC
GCGCAGGCGCTGCTGTCCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (206-405)

• SRP54-type protein, helical bundle domain (SRP54_N) (125-188)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	49.052	100	0.51