Detailed information
Bioinformatically predicted
Overview
| Name | luxP | Type | Regulator |
| Locus tag | GPY43_RS19230 | Genome accession | NZ_CP046798 |
| Coordinates | 804417..805514 (+) | Length | 365 a.a. |
| NCBI ID | WP_004726763.1 | Uniprot ID | A0A0Q2SGB9 |
| Organism | Vibrio furnissii strain 2013V-1001 | ||
| Function | autoinducer sensor (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 767142..803997 | 804417..805514 | flank | 420 |
Gene organization within MGE regions
Location: 767142..805514
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GPY43_RS18975 | - | 767142..769028 (-) | 1887 | WP_158108516.1 | hypothetical protein | - |
| GPY43_RS18985 | - | 769200..769487 (-) | 288 | WP_075990071.1 | phage tail assembly protein | - |
| GPY43_RS18990 | gpM | 769471..770178 (-) | 708 | WP_158108517.1 | phage terminase small subunit | - |
| GPY43_RS18995 | - | 770189..770554 (-) | 366 | WP_075990073.1 | phage tail tube protein | - |
| GPY43_RS19000 | - | 770558..771691 (-) | 1134 | WP_158108518.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| GPY43_RS19005 | - | 771688..771870 (-) | 183 | WP_014257446.1 | DUF2635 domain-containing protein | - |
| GPY43_RS19010 | - | 771871..772410 (-) | 540 | WP_158108519.1 | phage virion morphogenesis protein | - |
| GPY43_RS19015 | - | 772407..772871 (-) | 465 | WP_158108520.1 | phage tail protein | - |
| GPY43_RS19020 | - | 772871..773320 (-) | 450 | WP_158108521.1 | head completion/stabilization protein | - |
| GPY43_RS19025 | - | 773429..774466 (-) | 1038 | WP_158108522.1 | phage major capsid protein, P2 family | - |
| GPY43_RS19030 | - | 774509..775321 (-) | 813 | WP_158108523.1 | GPO family capsid scaffolding protein | - |
| GPY43_RS19035 | - | 775456..777216 (+) | 1761 | WP_199251497.1 | terminase family protein | - |
| GPY43_RS19040 | - | 777227..778183 (+) | 957 | WP_154179811.1 | phage portal protein | - |
| GPY43_RS19045 | - | 778205..778798 (-) | 594 | WP_158108525.1 | Fic family protein | - |
| GPY43_RS23685 | - | 778788..778946 (-) | 159 | WP_193386120.1 | hypothetical protein | - |
| GPY43_RS19050 | - | 779097..779705 (-) | 609 | WP_158108526.1 | KilA-N domain-containing protein | - |
| GPY43_RS19055 | - | 780316..780618 (+) | 303 | WP_158108527.1 | hypothetical protein | - |
| GPY43_RS19060 | - | 780720..781208 (+) | 489 | WP_158108528.1 | hypothetical protein | - |
| GPY43_RS24030 | - | 781338..781568 (-) | 231 | WP_241669725.1 | hypothetical protein | - |
| GPY43_RS19070 | - | 782431..782682 (-) | 252 | WP_004726819.1 | hypothetical protein | - |
| GPY43_RS19075 | - | 782673..782903 (-) | 231 | WP_020329260.1 | hypothetical protein | - |
| GPY43_RS19080 | - | 782914..783330 (-) | 417 | WP_020329261.1 | glycoside hydrolase family protein | - |
| GPY43_RS19085 | - | 783474..783950 (-) | 477 | WP_158108529.1 | hypothetical protein | - |
| GPY43_RS24035 | - | 783950..785194 (-) | 1245 | WP_242011158.1 | phage tail protein | - |
| GPY43_RS19095 | - | 785191..785670 (-) | 480 | WP_158108530.1 | hypothetical protein | - |
| GPY43_RS19100 | - | 785652..786698 (-) | 1047 | WP_158108531.1 | baseplate J/gp47 family protein | - |
| GPY43_RS19105 | - | 786695..787081 (-) | 387 | WP_158108532.1 | phage GP46 family protein | - |
| GPY43_RS19110 | - | 787078..787651 (-) | 574 | Protein_703 | phage baseplate assembly protein V | - |
| GPY43_RS19115 | - | 787644..788582 (-) | 939 | WP_158108533.1 | phage tail protein | - |
| GPY43_RS19120 | - | 788579..789769 (-) | 1191 | WP_158108534.1 | DNA circularization N-terminal domain-containing protein | - |
| GPY43_RS19130 | - | 791159..791410 (-) | 252 | WP_004726797.1 | ogr/Delta-like zinc finger family protein | - |
| GPY43_RS19135 | - | 791420..794050 (-) | 2631 | WP_158108536.1 | replication endonuclease | - |
| GPY43_RS19140 | - | 794094..794402 (+) | 309 | WP_061055532.1 | hypothetical protein | - |
| GPY43_RS19145 | - | 794592..794819 (-) | 228 | WP_158108537.1 | hypothetical protein | - |
| GPY43_RS19150 | - | 794801..795112 (-) | 312 | WP_158108538.1 | hypothetical protein | - |
| GPY43_RS19155 | - | 795185..795517 (-) | 333 | WP_004726788.1 | hypothetical protein | - |
| GPY43_RS19160 | - | 795527..796066 (-) | 540 | WP_004726786.1 | phage regulatory CII family protein | - |
| GPY43_RS19165 | - | 796124..796582 (-) | 459 | WP_004726785.1 | hypothetical protein | - |
| GPY43_RS19170 | - | 796730..797455 (+) | 726 | WP_047462994.1 | phage repressor protein | - |
| GPY43_RS19175 | - | 797729..798082 (+) | 354 | WP_158108539.1 | hypothetical protein | - |
| GPY43_RS19180 | - | 798238..798810 (-) | 573 | WP_158108540.1 | DUF5677 domain-containing protein | - |
| GPY43_RS19190 | - | 798944..799609 (-) | 666 | WP_158108542.1 | DUF4145 domain-containing protein | - |
| GPY43_RS19200 | - | 799743..800861 (-) | 1119 | WP_158108543.1 | hypothetical protein | - |
| GPY43_RS19205 | - | 801183..802151 (+) | 969 | WP_158108968.1 | tyrosine-type recombinase/integrase | - |
| GPY43_RS19210 | - | 802313..802630 (-) | 318 | WP_004726770.1 | DUF496 family protein | - |
| GPY43_RS19215 | - | 802820..803017 (+) | 198 | WP_055465619.1 | hypothetical protein | - |
| GPY43_RS19220 | - | 803061..803696 (+) | 636 | WP_004726766.1 | YceH family protein | - |
| GPY43_RS19225 | - | 803707..803997 (+) | 291 | WP_004726765.1 | GIY-YIG nuclease family protein | - |
| GPY43_RS19230 | luxP | 804417..805514 (+) | 1098 | WP_004726763.1 | autoinducer 2-binding periplasmic protein LuxP | Regulator |
Sequence
Protein
Download Length: 365 a.a. Molecular weight: 41539.74 Da Isoelectric Point: 5.2793
>NTDB_id=407975 GPY43_RS19230 WP_004726763.1 804417..805514(+) (luxP) [Vibrio furnissii strain 2013V-1001]
MKKTLFLSLLLGFTPFASSYSSQVLNGYWHYQEFLNANPQQKALTESLSDAVRQSSQRLTVKQQTPVTISVVYPGQQISD
YWVRNIKAFEMRLEELGIEYQINQVFTRPNQDTRQQSLSLMEAVKNNTDYLIFTLDTTRHRKFIEHVLNSSPTKLILQNI
TTPVRDWDERQPMMYVGFDHELGAQQLAQYYREHVPKGSKYSVLYFSEGYVSDARGDTFIQQMESTGDYQLASSYYTKAT
QESGYEATVNIVKNDPDIKFIYACSTDVALGAAKALQALKREDIQVNGWGGGSAELEALDEGHLDVTVMRINDDTGIAMA
EAIKRDLEGLAVPVVYSGDFEIVTKDDQPKKIGLFKQRAFRYSDR
MKKTLFLSLLLGFTPFASSYSSQVLNGYWHYQEFLNANPQQKALTESLSDAVRQSSQRLTVKQQTPVTISVVYPGQQISD
YWVRNIKAFEMRLEELGIEYQINQVFTRPNQDTRQQSLSLMEAVKNNTDYLIFTLDTTRHRKFIEHVLNSSPTKLILQNI
TTPVRDWDERQPMMYVGFDHELGAQQLAQYYREHVPKGSKYSVLYFSEGYVSDARGDTFIQQMESTGDYQLASSYYTKAT
QESGYEATVNIVKNDPDIKFIYACSTDVALGAAKALQALKREDIQVNGWGGGSAELEALDEGHLDVTVMRINDDTGIAMA
EAIKRDLEGLAVPVVYSGDFEIVTKDDQPKKIGLFKQRAFRYSDR
Nucleotide
Download Length: 1098 bp
>NTDB_id=407975 GPY43_RS19230 WP_004726763.1 804417..805514(+) (luxP) [Vibrio furnissii strain 2013V-1001]
ATGAAGAAAACGCTTTTTCTTTCTCTTTTACTTGGTTTCACTCCTTTTGCCTCTTCGTATTCATCACAAGTGCTGAATGG
TTACTGGCATTATCAGGAATTTCTGAATGCCAATCCGCAGCAAAAGGCGCTGACGGAGTCGTTGTCTGATGCGGTGCGTC
AGTCGTCTCAGCGGCTGACGGTCAAACAACAAACGCCAGTGACCATTTCGGTGGTTTATCCGGGGCAGCAGATCTCCGAT
TACTGGGTGCGCAACATCAAAGCATTTGAAATGCGATTGGAAGAGTTAGGCATCGAATACCAGATTAATCAGGTGTTTAC
GCGCCCGAACCAAGACACCCGCCAACAAAGCTTGTCGTTGATGGAAGCGGTGAAGAACAACACGGATTATTTGATTTTCA
CGCTGGATACAACGCGCCACCGCAAGTTTATTGAACACGTTCTGAATTCGTCACCGACCAAATTGATTTTGCAGAATATC
ACCACGCCGGTTCGAGACTGGGATGAACGCCAGCCGATGATGTACGTTGGGTTTGACCATGAACTCGGTGCGCAGCAACT
TGCGCAGTATTATCGCGAGCATGTTCCCAAAGGCAGCAAGTATTCGGTGCTGTATTTCTCTGAAGGGTACGTCAGCGATG
CGCGTGGCGACACGTTCATTCAGCAGATGGAAAGCACGGGCGATTACCAGCTGGCCTCGTCGTATTACACCAAAGCGACA
CAAGAAAGTGGCTATGAAGCCACCGTTAACATTGTCAAAAATGACCCGGATATTAAATTTATTTACGCCTGTTCCACCGA
TGTGGCACTGGGCGCAGCCAAGGCGCTACAAGCGTTAAAACGTGAAGATATTCAGGTGAATGGCTGGGGTGGAGGCTCGG
CAGAGCTAGAAGCCTTGGATGAAGGTCATCTTGATGTTACTGTCATGAGAATCAATGATGATACCGGCATCGCGATGGCG
GAAGCGATCAAACGTGATTTGGAAGGTTTGGCCGTGCCCGTGGTGTATTCCGGTGACTTTGAGATCGTGACCAAAGACGA
TCAGCCGAAAAAAATTGGTTTGTTTAAGCAACGCGCCTTTCGTTATTCCGACCGTTAG
ATGAAGAAAACGCTTTTTCTTTCTCTTTTACTTGGTTTCACTCCTTTTGCCTCTTCGTATTCATCACAAGTGCTGAATGG
TTACTGGCATTATCAGGAATTTCTGAATGCCAATCCGCAGCAAAAGGCGCTGACGGAGTCGTTGTCTGATGCGGTGCGTC
AGTCGTCTCAGCGGCTGACGGTCAAACAACAAACGCCAGTGACCATTTCGGTGGTTTATCCGGGGCAGCAGATCTCCGAT
TACTGGGTGCGCAACATCAAAGCATTTGAAATGCGATTGGAAGAGTTAGGCATCGAATACCAGATTAATCAGGTGTTTAC
GCGCCCGAACCAAGACACCCGCCAACAAAGCTTGTCGTTGATGGAAGCGGTGAAGAACAACACGGATTATTTGATTTTCA
CGCTGGATACAACGCGCCACCGCAAGTTTATTGAACACGTTCTGAATTCGTCACCGACCAAATTGATTTTGCAGAATATC
ACCACGCCGGTTCGAGACTGGGATGAACGCCAGCCGATGATGTACGTTGGGTTTGACCATGAACTCGGTGCGCAGCAACT
TGCGCAGTATTATCGCGAGCATGTTCCCAAAGGCAGCAAGTATTCGGTGCTGTATTTCTCTGAAGGGTACGTCAGCGATG
CGCGTGGCGACACGTTCATTCAGCAGATGGAAAGCACGGGCGATTACCAGCTGGCCTCGTCGTATTACACCAAAGCGACA
CAAGAAAGTGGCTATGAAGCCACCGTTAACATTGTCAAAAATGACCCGGATATTAAATTTATTTACGCCTGTTCCACCGA
TGTGGCACTGGGCGCAGCCAAGGCGCTACAAGCGTTAAAACGTGAAGATATTCAGGTGAATGGCTGGGGTGGAGGCTCGG
CAGAGCTAGAAGCCTTGGATGAAGGTCATCTTGATGTTACTGTCATGAGAATCAATGATGATACCGGCATCGCGATGGCG
GAAGCGATCAAACGTGATTTGGAAGGTTTGGCCGTGCCCGTGGTGTATTCCGGTGACTTTGAGATCGTGACCAAAGACGA
TCAGCCGAAAAAAATTGGTTTGTTTAAGCAACGCGCCTTTCGTTATTCCGACCGTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxP | Vibrio cholerae strain A1552 |
70.411 |
100 |
0.704 |