Detailed information NTG0407656

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: MS8324_RS18910
• Genome accession: NZ_CP058917
• Coordinates: 3855799..3856782 (-)
• Length: 327 a.a.
• NCBI ID: WP_001540025.1
• Uniprot ID: -
• Organism: Escherichia coli strain MS8324
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3850799..3861782

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MS8324_RS18885 (MS8324_3695)	bcsF	3850960..3851151 (+)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-
MS8324_RS18890 (MS8324_3696)	bcsG	3851148..3852827 (+)	1680	WP_000191567.1	cellulose biosynthesis protein BcsG	-
MS8324_RS18895 (MS8324_3697)	ldrD	3852914..3853021 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
MS8324_RS18900 (MS8324_3698)	yhjV	3853497..3854768 (+)	1272	WP_001298005.1	aromatic amino acid transport family protein	-
MS8324_RS18905 (MS8324_3699)	dppF	3854798..3855802 (-)	1005	WP_000103577.1	dipeptide ABC transporter ATP-binding subunit DppF	-
MS8324_RS18910 (MS8324_3700)	amiE	3855799..3856782 (-)	984	WP_001540025.1	dipeptide ABC transporter ATP-binding protein	Regulator
MS8324_RS18915 (MS8324_3701)	dppC	3856793..3857695 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
MS8324_RS18920 (MS8324_3702)	dppB	3857705..3858724 (-)	1020	WP_001540029.1	dipeptide ABC transporter permease DppB	-
MS8324_RS18925 (MS8324_3703)	dppA	3859031..3860638 (-)	1608	WP_001774075.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35792.37 Da
• Isoelectric Point: 6.4944

>NTDB_id=407656 MS8324_RS18910 WP_001540025.1 3855799..3856782(-) (amiE) [Escherichia coli strain MS8324]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFQAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=407656 MS8324_RS18910 WP_001540025.1 3855799..3856782(-) (amiE) [Escherichia coli strain MS8324]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCAATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATCCAGGCGCAAATCATCGAACTGCTGCTGGAGTTGCAGCAGAAAGAGAACATGGCGCTGGTGTTGATCACTCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCAGGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404