Detailed information NTG0407296

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: GPY31_RS22250
• Genome accession: NZ_CP046760
• Coordinates: 2814434..2815480 (+)
• Length: 348 a.a.
• NCBI ID: WP_254894148.1
• Uniprot ID: -
• Organism: Vibrio parahaemolyticus strain AM51552
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2809434..2820480

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GPY31_RS22225	rplC	2810007..2810636 (-)	630	WP_005456132.1	50S ribosomal protein L3	-
GPY31_RS22230	rpsJ	2810651..2810962 (-)	312	WP_004410492.1	30S ribosomal protein S10	-
GPY31_RS22235	rpmE	2811420..2811641 (-)	222	WP_005457203.1	50S ribosomal protein L31	-
GPY31_RS22245	priA	2811936..2814140 (+)	2205	WP_083110808.1	primosomal protein N'	-
GPY31_RS22250	cytR	2814434..2815480 (+)	1047	WP_254894148.1	DNA-binding transcriptional regulator CytR	Regulator
GPY31_RS22255	ftsN	2815657..2816202 (+)	546	WP_005481405.1	cell division protein FtsN	-
GPY31_RS22260	hslV	2816367..2816918 (+)	552	WP_005455873.1	ATP-dependent protease subunit HslV	-
GPY31_RS22265	hslU	2816942..2818273 (+)	1332	WP_021449544.1	HslU--HslV peptidase ATPase subunit	-
GPY31_RS22270	-	2818458..2819375 (+)	918	WP_158111859.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
GPY31_RS22275	rraA	2819452..2819964 (+)	513	WP_005457192.1	ribonuclease E activity regulator RraA	-
GPY31_RS22280	zapB	2820069..2820311 (-)	243	WP_005481417.1	cell division protein ZapB	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 38445.17 Da
• Isoelectric Point: 6.7430

>NTDB_id=407296 GPY31_RS22250 WP_254894148.1 2814434..2815480(+) (cytR) [Vibrio parahaemolyticus strain AM51552]
MTSSWQKFERLNTMATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVP
DICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEF
APELELPTVHIDNLTSAFEAVNYLTQLGHKRIAQISGPDTAVLCQFRQQGYQQALRRAGISKDPQYSVITEFSFDGGAKA
VRKLLELPEPPTAIFCHCDTMAIGAIQEAKRLGLRVPQDLSVVGFDDINFAQYCDPPLTTISQPRYEIGRQAMLMMLELL
KGHDVHSGSRLLETKLVVRGSAAPPQRA

Nucleotide

• Length: 1047 bp

>NTDB_id=407296 GPY31_RS22250 WP_254894148.1 2814434..2815480(+) (cytR) [Vibrio parahaemolyticus strain AM51552]
ATAACGTCATCTTGGCAAAAATTTGAGAGGTTAAACACTATGGCGACAATGAAGGATGTTGCCCAGCTTGCGGGAGTGTC
GACAGCTACGGTATCTCGAGCATTAATGAATCCAGAAAAAGTCTCTTCTTCAACCAGAAAAAGAGTCGAAGATGCCGTCC
TTGAAGCGGGCTATTCTCCAAATTCATTAGCGCGTAATCTACGTAGAAACGAATCAAAAACGATTGTTACCATCGTTCCT
GACATCTGTGATCCTTACTTTTCTGAAATCATTCGAGGTATCGAAGACGCCGCTATGGAACATGGCTACCTCGTACTGCT
CGGTGACAGCGGCCAGCAGAAAAAGCGTGAAAGCTCGTTTGTGAATCTAGTGTTCACCAAACAAGCCGATGGCATGTTAC
TGCTTGGCACCGACCTGCCATTTGATGTCAGCAAGCCAGAACAGAAAAACCTGCCACCCATGGTCATGGCTTGTGAGTTT
GCGCCAGAGCTAGAATTACCAACCGTGCACATTGACAACCTAACGTCTGCTTTTGAAGCGGTCAATTACCTAACTCAGCT
TGGCCATAAACGCATAGCGCAAATTTCAGGACCAGACACAGCGGTATTGTGTCAGTTCCGCCAGCAAGGTTATCAACAAG
CCTTGCGTCGCGCGGGGATCAGTAAAGACCCACAATACAGCGTTATCACTGAGTTTTCTTTTGACGGCGGCGCGAAAGCT
GTACGTAAGTTGCTAGAACTTCCTGAGCCACCAACTGCGATTTTCTGCCACTGTGACACCATGGCAATCGGCGCAATCCA
AGAAGCGAAACGACTCGGTCTGCGCGTTCCGCAAGATTTGTCAGTGGTTGGTTTCGATGATATCAACTTTGCTCAATACT
GCGATCCACCGTTAACGACCATTTCTCAACCTCGTTATGAAATTGGCCGCCAAGCGATGCTTATGATGCTTGAACTACTT
AAAGGCCATGACGTTCATTCAGGTTCACGCTTACTAGAAACTAAGCTTGTTGTCCGTGGTAGCGCAGCGCCACCGCAACG
CGCCTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (181-341)

• Bacterial regulatory proteins, lacI family (LacI) (16-61)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	100	100	1
cytR	Vibrio cholerae C6706	90.719	95.977	0.871