Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   SSU10_RS04955 Genome accession   NZ_CP058742
Coordinates   1004261..1004743 (+) Length   160 a.a.
NCBI ID   WP_012028247.1    Uniprot ID   A0A0H3MUQ1
Organism   Streptococcus suis strain 10     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 999261..1009743
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SSU10_RS04930 (SSU10_00996) - 1000508..1001818 (-) 1311 WP_012775168.1 GntP family permease -
  SSU10_RS04935 (SSU10_00997) folK 1001869..1002357 (-) 489 WP_012027112.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  SSU10_RS04940 (SSU10_00998) folB 1002354..1002716 (-) 363 WP_012027113.1 dihydroneopterin aldolase -
  SSU10_RS04945 (SSU10_00999) folP 1002709..1003521 (-) 813 WP_002938084.1 dihydropteroate synthase -
  SSU10_RS04950 (SSU10_01000) folE 1003530..1004093 (-) 564 WP_002938082.1 GTP cyclohydrolase I FolE -
  SSU10_RS04955 (SSU10_01001) mutX 1004261..1004743 (+) 483 WP_012028247.1 8-oxo-dGTP diphosphatase Machinery gene
  SSU10_RS04960 (SSU10_01002) - 1004791..1005468 (-) 678 WP_012027115.1 DUF4956 domain-containing protein -
  SSU10_RS04965 (SSU10_01003) - 1005455..1006198 (-) 744 WP_012027116.1 polyphosphate polymerase domain-containing protein -
  SSU10_RS04970 (SSU10_01004) - 1006391..1006693 (+) 303 WP_002938072.1 hypothetical protein -
  SSU10_RS04975 (SSU10_01005) - 1006714..1006980 (-) 267 WP_012775169.1 DUF2087 domain-containing protein -
  SSU10_RS04980 (SSU10_01006) pheT 1007035..1009434 (-) 2400 WP_012027118.1 phenylalanine--tRNA ligase subunit beta -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18554.91 Da        Isoelectric Point: 4.4960

>NTDB_id=407225 SSU10_RS04955 WP_012028247.1 1004261..1004743(+) (mutX) [Streptococcus suis strain 10]
MTKKPVQLATICYIDNGKEFLLLHRNKKENDVHQGKWIGVGGKLEPGETPQACAIREIFEETGLTVTKHALKGVITFPDF
TPNTDWYTYVFKITGFEGSLIDCNEGDLEWVPYDQVLSKPTWEGDRHFQEWLLEDKPFFSACFRYDGDKLLDYSVDFYEE

Nucleotide


Download         Length: 483 bp        

>NTDB_id=407225 SSU10_RS04955 WP_012028247.1 1004261..1004743(+) (mutX) [Streptococcus suis strain 10]
ATGACCAAGAAACCTGTCCAACTGGCTACGATTTGCTACATTGATAATGGCAAAGAATTTCTCCTGCTCCATCGCAATAA
AAAAGAAAACGATGTCCACCAGGGGAAATGGATTGGGGTCGGTGGTAAGCTGGAACCCGGTGAAACACCGCAGGCTTGTG
CCATTCGAGAAATCTTTGAGGAAACTGGGCTTACTGTAACGAAGCATGCTCTAAAAGGAGTGATAACCTTCCCAGACTTT
ACTCCAAACACTGACTGGTACACCTATGTCTTTAAGATAACTGGTTTTGAAGGAAGTCTTATTGACTGCAATGAAGGTGA
CTTAGAGTGGGTTCCCTATGACCAAGTCTTGTCCAAACCAACTTGGGAGGGCGACCGGCATTTTCAAGAATGGCTATTAG
AGGACAAACCATTTTTTTCCGCTTGCTTCCGCTATGATGGGGACAAATTGCTTGATTATAGCGTTGATTTTTATGAAGAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(8-132)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3MUQ1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

81.699

95.625

0.781

Multiple sequence alignment