Detailed information NTG0407217

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: SSU10_RS04175
• Genome accession: NZ_CP058742
• Coordinates: 854924..855994 (+)
• Length: 356 a.a.
• NCBI ID: WP_012775101.1
• Uniprot ID: A0A0H3MV97
• Organism: Streptococcus suis strain 10
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 849924..860994

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SSU10_RS04150 (SSU10_00839)	-	851039..851707 (+)	669	WP_011922395.1	SatD family protein	-
SSU10_RS04155 (SSU10_00840)	-	851711..852451 (+)	741	WP_011922396.1	DUF3307 domain-containing protein	-
SSU10_RS04160 (SSU10_00841)	-	852516..852953 (+)	438	WP_011922397.1	AAA family ATPase	-
SSU10_RS04170 (SSU10_00843)	-	853664..854565 (+)	902	Protein_772	Abi family protein	-
SSU10_RS04175 (SSU10_00844)	xerS	854924..855994 (+)	1071	WP_012775101.1	tyrosine recombinase XerS	Machinery gene
SSU10_RS04180 (SSU10_00845)	-	856064..857572 (-)	1509	WP_011922400.1	phosphomannomutase/phosphoglucomutase	-
SSU10_RS04185 (SSU10_00846)	-	857648..858589 (-)	942	WP_012775102.1	sensor histidine kinase	-
SSU10_RS04190 (SSU10_00847)	braR	858586..859251 (-)	666	WP_012775103.1	response regulator transcription factor	Regulator
SSU10_RS04195 (SSU10_00848)	-	859290..859547 (-)	258	WP_011922404.1	type II toxin-antitoxin system RelE/ParE family toxin	-
SSU10_RS04200 (SSU10_00849)	relB	859531..859782 (-)	252	WP_012775104.1	type II toxin-antitoxin system RelB family antitoxin	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41485.66 Da
• Isoelectric Point: 9.2257

>NTDB_id=407217 SSU10_RS04175 WP_012775101.1 854924..855994(+) (xerS) [Streptococcus suis strain 10]
MRRELLLEKIDQLKEIMPWFVLEYYQSKLAVPYSFTTLYEYLKEYRRFFEWLQDSDLVAVERIADIPLDVLEHLTKKDME
AFILYLRERPLLNANTTQNGVSQTTINRTLSALSSLFKYLTEEVENEQGEPYFYRNVMKKVSTKKKKETLAARAENIKQK
LFLGDETMEFLDYVDKEYQVNLSKRALSSFQKNKERDLAILALLLASGVRLSEAVNLDLRDVNLNMMIIEVTRKGGKRDS
VNVAGFAKPYLEAYMGIRQQRYKAEKTDTAFFLSEYRGLPNRIDASSIEKMVAKYSADFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHANTQVTDLYTHIVNDEQKNALDQL

Nucleotide

• Length: 1071 bp

>NTDB_id=407217 SSU10_RS04175 WP_012775101.1 854924..855994(+) (xerS) [Streptococcus suis strain 10]
ATGAGACGCGAGTTATTATTGGAAAAAATTGATCAACTAAAAGAAATTATGCCTTGGTTTGTTCTGGAATATTATCAGTC
AAAATTGGCTGTGCCTTACAGTTTTACTACCTTATATGAATACTTGAAAGAATACCGTCGTTTTTTTGAATGGTTACAGG
ATTCGGATTTGGTGGCTGTTGAACGGATTGCTGACATTCCGCTGGATGTTCTGGAACATCTGACAAAAAAAGATATGGAA
GCTTTCATTCTTTATCTGCGGGAGCGTCCCTTGCTGAACGCCAATACCACGCAGAATGGTGTGTCGCAGACCACCATTAA
CCGTACCCTCTCGGCCCTTTCTAGTCTCTTCAAGTATTTAACCGAAGAAGTGGAGAATGAGCAGGGCGAGCCCTACTTCT
ACCGCAATGTCATGAAAAAGGTATCTACTAAGAAGAAGAAGGAAACCTTGGCAGCGCGGGCGGAGAACATCAAGCAAAAG
CTCTTTTTGGGCGATGAAACGATGGAGTTCTTGGACTATGTGGACAAGGAATACCAAGTCAATCTCTCTAAACGTGCCCT
CTCCTCCTTCCAGAAAAATAAGGAGCGGGATTTGGCGATTCTGGCGCTTCTCTTGGCTTCTGGCGTCCGTCTGTCAGAAG
CGGTGAATTTGGATCTTCGAGATGTAAACCTCAATATGATGATTATCGAAGTAACTCGTAAGGGTGGTAAACGGGACTCG
GTCAATGTGGCTGGGTTTGCTAAGCCCTACTTAGAAGCCTACATGGGCATCCGTCAGCAACGCTACAAGGCTGAAAAAAC
GGATACAGCCTTCTTCCTGTCCGAATACCGTGGTCTGCCTAACCGTATCGATGCTTCTTCTATTGAAAAAATGGTTGCCA
AGTACTCTGCGGACTTCAAGATACGCGTAACCCCCCACAAACTCCGTCACACATTGGCAACTCGTCTCTACGACGCCACC
AAGTCGCAAGTTCTAGTCAGTCATCAGCTGGGCCATGCCAATACCCAGGTCACCGATCTCTACACCCATATCGTCAACGA
TGAACAGAAAAATGCTCTGGATCAGTTGTGA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (190-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

3D structure

• AlphaFold DB: A0A0H3MV97

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	83.146	100	0.831