Detailed information NTG0406880

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: HZS87_RS16120
• Genome accession: NZ_CP058725
• Coordinates: 3303548..3304531 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain S171-1
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3298548..3309531

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HZS87_RS16100	dppA	3299691..3301298 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
HZS87_RS16105	-	3301355..3301588 (-)	234	WP_162720768.1	hypothetical protein	-
HZS87_RS16110	dppB	3301606..3302625 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
HZS87_RS16115	dppC	3302635..3303537 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
HZS87_RS16120	amiE	3303548..3304531 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
HZS87_RS16125	dppF	3304528..3305532 (+)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
HZS87_RS16130	yhjV	3305562..3306833 (-)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
HZS87_RS16135	ldrD	3307309..3307416 (+)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
HZS87_RS16140	bcsG	3307503..3309182 (-)	1680	WP_000191596.1	cellulose biosynthesis protein BcsG	-
HZS87_RS16145	bcsF	3309179..3309370 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=406880 HZS87_RS16120 WP_001196486.1 3303548..3304531(+) (amiE) [Escherichia coli strain S171-1]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=406880 HZS87_RS16120 WP_001196486.1 3303548..3304531(+) (amiE) [Escherichia coli strain S171-1]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404