Detailed information    

insolico Bioinformatically predicted

Overview

Name   recR   Type   Machinery gene
Locus tag   HZS86_RS11095 Genome accession   NZ_CP058719
Coordinates   2286092..2286697 (+) Length   201 a.a.
NCBI ID   WP_001195025.1    Uniprot ID   P0A7H7
Organism   Escherichia coli strain M159-1     
Function   promote later steps in plasmid transformation (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2281092..2291697
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HZS86_RS11065 rsmS 2281797..2281958 (-) 162 WP_000051153.1 pleiotropic regulatory protein RsmS -
  HZS86_RS11070 priC 2281972..2282499 (-) 528 WP_000844874.1 primosomal replication protein N'' -
  HZS86_RS11075 ybaN 2282569..2282946 (+) 378 WP_001188905.1 DUF454 family protein -
  HZS86_RS11080 apt 2283099..2283650 (+) 552 WP_000127356.1 adenine phosphoribosyltransferase -
  HZS86_RS11085 dnaX 2283779..2285710 (+) 1932 WP_000122013.1 DNA polymerase III subunit gamma/tau -
  HZS86_RS11090 ybaB 2285763..2286092 (+) 330 WP_000467098.1 YbaB/EbfC family nucleoid-associated protein -
  HZS86_RS11095 recR 2286092..2286697 (+) 606 WP_001195025.1 recombination mediator RecR Machinery gene
  HZS86_RS11100 htpG 2286807..2288681 (+) 1875 WP_000678201.1 molecular chaperone HtpG -
  HZS86_RS11105 adk 2288862..2289506 (+) 645 WP_001220233.1 adenylate kinase -
  HZS86_RS11110 hemH 2289742..2290704 (+) 963 WP_001250088.1 ferrochelatase -
  HZS86_RS11115 aes 2290701..2291660 (-) 960 WP_063501955.1 acetyl esterase -

Sequence

Protein


Download         Length: 201 a.a.        Molecular weight: 21963.00 Da        Isoelectric Point: 4.9097

>NTDB_id=406798 HZS86_RS11095 WP_001195025.1 2286092..2286697(+) (recR) [Escherichia coli strain M159-1]
MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQEVCNICSNPRRQEN
GQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAEL
CAQYDVEASRIAHGVPVGGELEMVDGTTLSHSLAGRHKIRF

Nucleotide


Download         Length: 606 bp        

>NTDB_id=406798 HZS86_RS11095 WP_001195025.1 2286092..2286697(+) (recR) [Escherichia coli strain M159-1]
ATGCAAACCAGCCCGCTGTTAACACAGCTTATGGAAGCACTGCGCTGTCTGCCGGGCGTTGGCCCGAAGTCGGCGCAGCG
TATGGCGTTCACGCTGCTTCAGCGCGATCGTAGCGGCGGGATGCGTCTGGCGCAGGCGCTCACCCGGGCGATGTCGGAAA
TCGGCCACTGCGCCGATTGCCGCACTTTCACCGAACAGGAAGTCTGTAACATCTGTTCGAATCCGCGTCGTCAGGAAAAC
GGTCAAATCTGTGTGGTGGAGAGTCCGGCGGACATCTACGCCATTGAGCAGACGGGGCAGTTTTCAGGCCGTTATTTTGT
GTTGATGGGGCACCTGTCACCGCTGGACGGCATCGGTCCGGATGATATCGGCCTTGATCGTCTGGAACAGCGTCTGGCAG
AGGAAAAAATCACTGAAGTGATCCTCGCCACCAATCCCACGGTTGAAGGTGAAGCTACCGCTAACTACATTGCCGAGCTT
TGCGCGCAATATGACGTGGAAGCCAGCCGAATCGCTCATGGCGTACCGGTTGGCGGCGAACTGGAAATGGTCGATGGCAC
CACGCTGTCACACTCCCTTGCCGGGCGTCATAAGATTCGTTTTTAA

Domains

Predicted by InterProScan.

RecR protein (RecR_ZnF)

(41-77)

Toprim domain (Toprim_4)

(81-172)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P0A7H7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recR Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

45.226

99.005

0.448
  recR Bacillus subtilis subsp. subtilis str. 168

44.724

99.005

0.443