Detailed information NTG0406701

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: HYI45_RS10665
• Genome accession: NZ_CP058714
• Coordinates: 2228435..2229418 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196484.1
• Uniprot ID: -
• Organism: Escherichia coli strain M172-1
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 2223435..2234418

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HYI45_RS10650	dppA	2224735..2226342 (+)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-
HYI45_RS10655	dppB	2226493..2227512 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
HYI45_RS10660	dppC	2227522..2228424 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
HYI45_RS10665	amiE	2228435..2229418 (+)	984	WP_001196484.1	dipeptide ABC transporter ATP-binding protein	Regulator
HYI45_RS10670	dppF	2229415..2230419 (+)	1005	WP_000107033.1	dipeptide ABC transporter ATP-binding subunit DppF	-
HYI45_RS10675	yhjV	2230449..2231720 (-)	1272	WP_001307456.1	aromatic amino acid transport family protein	-
HYI45_RS10680	-	2232196..2232303 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
HYI45_RS10685	-	2232679..2232786 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
HYI45_RS10690	-	2233163..2233270 (+)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
HYI45_RS10695	-	2233647..2233754 (+)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
HYI45_RS10700	-	2234131..2234238 (+)	108	WP_000170736.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35816.35 Da
• Isoelectric Point: 6.5813

>NTDB_id=406701 HYI45_RS10665 WP_001196484.1 2228435..2229418(+) (amiE) [Escherichia coli strain M172-1]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=406701 HYI45_RS10665 WP_001196484.1 2228435..2229418(+) (amiE) [Escherichia coli strain M172-1]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTAGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATTGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGTCAGGTGGTGGAAACGGGCGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGATAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGTCCGAACGGCTGCCTGCTTAACCCGCGCTGTCCCTACGCCA
CTGACAAATGCCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCACTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404