Detailed information NTG0406669

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: GJB62_RS08185
• Genome accession: NZ_CP046703
• Coordinates: 2001468..2002574 (-)
• Length: 368 a.a.
• NCBI ID: WP_114085264.1
• Uniprot ID: A0A6P1KKZ6
• Organism: Nostoc sp. ATCC 53789
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1996468..2007574

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GJB62_RS08170 (GJB62_08115)	-	1997244..1999667 (-)	2424	WP_114085261.1	type IV pilus secretin family protein	-
GJB62_RS08175 (GJB62_08120)	-	1999825..2000601 (-)	777	WP_114085262.1	pilus assembly protein PilO	-
GJB62_RS08180 (GJB62_08125)	-	2000598..2001374 (-)	777	WP_114085263.1	PilN domain-containing protein	-
GJB62_RS08185 (GJB62_08130)	pilM	2001468..2002574 (-)	1107	WP_114085264.1	type IV pilus biogenesis protein PilM	Machinery gene
GJB62_RS08190 (GJB62_08135)	-	2002728..2004026 (+)	1299	WP_114085265.1	sugar ABC transporter substrate-binding protein	-
GJB62_RS08195 (GJB62_08140)	-	2004042..2005337 (-)	1296	WP_114085266.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-
GJB62_RS08200 (GJB62_08145)	-	2005503..2005628 (-)	126	WP_012411301.1	photosystem II protein Y	-
GJB62_RS08205 (GJB62_08150)	-	2006114..2006644 (-)	531	WP_114085267.1	gamma carbonic anhydrase family protein	-
GJB62_RS08210 (GJB62_08155)	-	2006885..2007397 (+)	513	WP_114085268.1	TIGR02652 family protein	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 40652.64 Da
• Isoelectric Point: 4.4545

>NTDB_id=406669 GJB62_RS08185 WP_114085264.1 2001468..2002574(-) (pilM) [Nostoc sp. ATCC 53789]
MVQKFNRLFGKSNKGVGIELAPERVNVVQLRKQRQGLKLETFTSVAVPEGVVTDGQITDPAAMAQLIQQALAESKIKTTR
VATGVPGRDSIVRIIPVPTELDDKELREMVLNHEAGLYLPYPREEADVDYQKLDYFVDEDGIEKVHVLLVATRKEITDTY
ISTFEQAGLQIDVLEINSFALIRTIREQLRQFGPQEAAVLVDIEFDSTEIAIIVNGVPQFSRTVPIGTYQMQTALARAMS
LPTSRDMELLHGMIIPPTPLDGGKTGVTEIDPGMAAILRVLGELTDELRRSIDFYLNQSENLEVAQILLAGPGGGLQQLD
EFFTQRLSLPTTQIDPIGSLSLEVDTDKYPQVQRSGLAIVLGLGMREV

Nucleotide

• Length: 1107 bp

>NTDB_id=406669 GJB62_RS08185 WP_114085264.1 2001468..2002574(-) (pilM) [Nostoc sp. ATCC 53789]
GTGGTACAAAAATTCAATCGTCTGTTTGGCAAATCGAATAAAGGGGTCGGCATTGAACTTGCTCCCGAACGGGTAAATGT
AGTTCAGCTACGCAAACAGCGTCAAGGCTTGAAACTAGAAACCTTTACATCGGTAGCAGTTCCAGAAGGCGTAGTTACCG
ATGGTCAAATCACCGATCCCGCAGCAATGGCGCAATTAATCCAGCAGGCGCTAGCTGAAAGCAAAATCAAAACTACTCGT
GTTGCCACTGGTGTACCAGGGCGAGATTCCATCGTTCGGATTATACCTGTACCAACGGAGTTAGATGACAAAGAACTGCG
AGAAATGGTGCTAAACCATGAAGCAGGTTTGTATTTACCCTATCCTCGTGAAGAAGCTGATGTAGATTATCAAAAACTTG
ACTACTTTGTAGATGAGGATGGCATTGAAAAAGTACATGTACTTCTAGTAGCCACTCGCAAGGAAATAACGGATACCTAT
ATAAGTACATTCGAACAGGCAGGACTACAAATTGATGTTTTAGAAATTAACAGTTTTGCCCTGATTAGGACTATTCGTGA
GCAACTACGACAATTTGGGCCGCAAGAAGCAGCAGTCCTAGTTGATATAGAGTTCGACAGTACAGAAATCGCCATCATTG
TTAACGGAGTACCGCAATTTTCGCGCACAGTGCCCATAGGCACTTATCAAATGCAAACTGCGTTAGCAAGGGCAATGAGC
TTACCCACATCACGAGATATGGAACTGTTACACGGAATGATTATTCCCCCAACTCCCCTAGATGGTGGGAAAACCGGTGT
TACCGAAATCGATCCTGGTATGGCAGCCATATTAAGAGTATTGGGAGAGCTAACGGATGAACTGCGCCGTTCAATCGATT
TTTACCTTAATCAAAGTGAAAATTTGGAGGTAGCGCAGATTTTATTAGCTGGGCCAGGAGGCGGACTCCAACAGCTAGAT
GAATTCTTTACCCAACGATTGAGCTTACCAACTACCCAAATAGATCCAATTGGGTCTTTGTCGTTAGAAGTTGACACTGA
TAAATATCCACAGGTACAACGCTCTGGCTTGGCGATTGTACTTGGTTTAGGTATGCGGGAGGTGTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (283-367)

• Type IV pilus assembly protein PilM; (PilM_2) (17-238)

3D structure

• AlphaFold DB: A0A6P1KKZ6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Synechocystis sp. PCC 6803	65.94	99.728	0.658