Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   HYQ63_RS31105 Genome accession   NZ_CP058693
Coordinates   7224227..7225030 (-) Length   267 a.a.
NCBI ID   WP_179937129.1    Uniprot ID   -
Organism   Streptomyces sp. Rer75     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 7219227..7230030
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HYQ63_RS31095 (HYQ63_31095) - 7221282..7221965 (+) 684 WP_179937127.1 GNAT family N-acetyltransferase -
  HYQ63_RS31100 (HYQ63_31100) - 7222133..7224133 (+) 2001 WP_179937128.1 ATP-dependent DNA helicase -
  HYQ63_RS31105 (HYQ63_31105) dinR/lexA 7224227..7225030 (-) 804 WP_179937129.1 transcriptional repressor LexA Regulator
  HYQ63_RS31110 (HYQ63_31110) nrdR 7225554..7226075 (+) 522 WP_179937130.1 transcriptional regulator NrdR -
  HYQ63_RS31115 (HYQ63_31115) - 7226190..7229054 (+) 2865 WP_179937131.1 vitamin B12-dependent ribonucleotide reductase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 28974.69 Da        Isoelectric Point: 7.4238

>NTDB_id=406559 HYQ63_RS31105 WP_179937129.1 7224227..7225030(-) (dinR/lexA) [Streptomyces sp. Rer75]
MTTTAESATVTAQERSQSRLEQTHAMNQTQAINDASTNPEGQKTTRSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRR
GYPPSMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPSAQPTDTTGKPAASYVPLVGRIAAGGPI
LAEESVEDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLL
PHNAAYQPIPGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 804 bp        

>NTDB_id=406559 HYQ63_RS31105 WP_179937129.1 7224227..7225030(-) (dinR/lexA) [Streptomyces sp. Rer75]
GTGACCACCACCGCAGAGAGCGCCACTGTTACCGCCCAGGAGCGCTCCCAGAGCCGACTCGAACAGACGCACGCGATGAA
TCAGACTCAGGCGATCAACGACGCGAGCACGAACCCGGAGGGGCAGAAGACGACCCGATCACTACCCGGGCGACCTCCAG
GCATCCGGGCGGACAGTTCAGGGCTGACCGACCGGCAGCGTCGCGTCATCGAAGTCATCCGCGACTCTGTGCAGCGGCGC
GGCTACCCCCCGTCCATGCGGGAGATCGGTCAGGCGGTGGGCCTCTCCAGCACCTCGTCCGTCGCCCATCAGCTGATGGC
CCTGGAGCGCAAGGGCTTCCTGCGGCGTGACCCCCACCGGCCCCGGGCGTACGAGGTCCGTGGCTCGGACCAGCCCAGCG
CGCAGCCGACAGACACCACCGGCAAGCCCGCCGCCTCCTATGTGCCGCTGGTCGGCCGGATCGCGGCCGGCGGGCCCATC
CTCGCCGAGGAGTCGGTCGAGGATGTCTTCCCCCTCCCCCGCCAGCTGGTCGGCGACGGTGAGCTGTTCGTCCTGAAGGT
GGTCGGCGACTCCATGATCGAGGCCGCCATCTGCGACGGGGACTGGGTCACGGTGCGCCGCCAGCCCGTCGCAGAGAACG
GTGACATCGTCGCCGCGATGCTCGACGGGGAAGCGACGGTGAAGCGGTTCAAGCGCGAGGACGGCCATGTCTGGCTGCTC
CCGCACAACGCCGCGTACCAGCCGATCCCCGGTGACGAGGCGACCATTCTGGGCAAGGTCGTCGCGGTGCTGCGGCGCGT
CTGA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(60-123)

Peptidase S24-like (Peptidase_S24)

(149-261)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.226

79.401

0.367