Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   GPA07_RS15655 Genome accession   NZ_CP046653
Coordinates   2997146..2997937 (-) Length   263 a.a.
NCBI ID   WP_157292937.1    Uniprot ID   -
Organism   Bacillus sp. ms-22     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 2992146..3002937
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GPA07_RS15630 (GPA07_15630) - 2994386..2995369 (-) 984 WP_008360610.1 glycosyltransferase family 2 protein -
  GPA07_RS15635 (GPA07_15635) - 2995666..2995938 (-) 273 WP_008360607.1 YfhJ family protein -
  GPA07_RS15640 (GPA07_15640) - 2996055..2996204 (+) 150 WP_157292936.1 small, acid-soluble spore protein K -
  GPA07_RS15645 (GPA07_15645) - 2996230..2996403 (+) 174 WP_008360604.1 YpzG family protein -
  GPA07_RS15650 (GPA07_15650) - 2996828..2997142 (-) 315 WP_008359305.1 YfhH family protein -
  GPA07_RS15655 (GPA07_15655) recX 2997146..2997937 (-) 792 WP_157292937.1 recombination regulator RecX Regulator
  GPA07_RS15660 (GPA07_15660) - 2998032..2998928 (+) 897 WP_071167881.1 TIGR01777 family oxidoreductase -
  GPA07_RS15665 (GPA07_15665) - 2998982..2999092 (+) 111 WP_017358836.1 YfhE family protein -
  GPA07_RS15670 (GPA07_15670) - 2999154..2999309 (+) 156 WP_157292938.1 YfhD family protein -
  GPA07_RS15675 (GPA07_15675) - 2999349..2999936 (-) 588 WP_034739279.1 nitroreductase -
  GPA07_RS15680 (GPA07_15680) - 3000208..3001464 (+) 1257 WP_008359300.1 transcriptional regulator -
  GPA07_RS15685 (GPA07_15685) - 3001501..3001968 (-) 468 WP_008359299.1 DUF393 domain-containing protein -
  GPA07_RS15690 (GPA07_15690) - 3002306..3002854 (-) 549 WP_008359296.1 thioredoxin family protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30629.05 Da        Isoelectric Point: 7.5049

>NTDB_id=406454 GPA07_RS15655 WP_157292937.1 2997146..2997937(-) (recX) [Bacillus sp. ms-22]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIEIQFGDAVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKDIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDTIEQALSQYPNDLQLEE
AVKQVLKLVKKEKNRSAKEIEQRIKLQLQRKGFSFDIIDKALQEAYDGQEEEKEEEALHYMLEKAKRKVGYDGSFEKKMK
VKQFLYRKGFDLNTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=406454 GPA07_RS15655 WP_157292937.1 2997146..2997937(-) (recX) [Bacillus sp. ms-22]
ATGCCGTATATTACGAAAATTTCTGCTCAGAAAAACAATACAGAGCGCGTGAACATCTTTCTTGATGAAAAGTACGCGTT
TAGCGTGGATCTAGATGTGCTCGTCCAACACGATTTGAAAAAGGGGAAAGAACTGGACGAAGCCGATATCATAGAGATTC
AATTCGGTGATGCAGTGAAAAAAGGATTTCAGCAGGCCGTTGATTATTTATCCTATCGCATGAGATCGGTGAAGGAAGTC
ACCGATTATTTGACGAAAAAAGACATACCTGCACCTGCTATTAGTGAAATTATACACAAATTAAAGCATTACAAGTATGT
CAATGATCTTGAATTTGCTGAAGCATATGTGAGCACTCACCGAAAAACGAACAGCAAAGGCCCGTCCGTCCTAAAAAAAG
AATTAAAGCTAAAAGGCATAGACGATGACACCATTGAACAAGCGCTATCGCAATATCCGAACGATTTGCAGCTAGAGGAA
GCTGTCAAACAAGTTCTCAAGCTTGTAAAGAAAGAGAAAAATCGTTCTGCAAAAGAGATTGAGCAGCGCATCAAGCTGCA
GCTTCAGCGCAAGGGATTTTCATTTGATATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCCCTCCACTATATGCTGGAGAAGGCAAAACGCAAGGTAGGATATGACGGGTCATTTGAAAAGAAGATGAAA
GTGAAGCAGTTTCTTTACCGGAAAGGCTTTGATCTTAATACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

63.118

100

0.631

Multiple sequence alignment