Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   GPA07_RS14205 Genome accession   NZ_CP046653
Coordinates   2714299..2714496 (-) Length   65 a.a.
NCBI ID   WP_008355272.1    Uniprot ID   A0AAC9IDZ6
Organism   Bacillus sp. ms-22     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2709299..2719496
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GPA07_RS14180 (GPA07_14180) - 2709662..2710642 (-) 981 WP_071167785.1 ABC transporter ATP-binding protein -
  GPA07_RS14185 (GPA07_14185) - 2710810..2711607 (-) 798 WP_008355281.1 DUF2268 domain-containing protein -
  GPA07_RS14190 (GPA07_14190) fabF 2711685..2712926 (-) 1242 WP_071167786.1 beta-ketoacyl-ACP synthase II -
  GPA07_RS14195 (GPA07_14195) - 2712948..2713886 (-) 939 WP_071167787.1 beta-ketoacyl-ACP synthase III -
  GPA07_RS14200 (GPA07_14200) - 2714056..2714289 (+) 234 WP_008355274.1 hypothetical protein -
  GPA07_RS14205 (GPA07_14205) comZ 2714299..2714496 (-) 198 WP_008355272.1 ComZ family protein Regulator
  GPA07_RS14210 (GPA07_14210) med 2714508..2715467 (-) 960 WP_008355270.1 BMP family ABC transporter substrate-binding protein Regulator
  GPA07_RS14215 (GPA07_14215) - 2715558..2716136 (-) 579 WP_008355268.1 hypothetical protein -
  GPA07_RS14220 (GPA07_14220) - 2716212..2716952 (-) 741 WP_008355266.1 hypothetical protein -
  GPA07_RS14225 (GPA07_14225) - 2717126..2717583 (-) 458 Protein_2806 DinB family protein -
  GPA07_RS14230 (GPA07_14230) - 2717881..2718075 (+) 195 WP_071167789.1 YjzD family protein -
  GPA07_RS14235 (GPA07_14235) - 2718194..2719459 (-) 1266 WP_157292849.1 MFS transporter -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7367.36 Da        Isoelectric Point: 4.0863

>NTDB_id=406445 GPA07_RS14205 WP_008355272.1 2714299..2714496(-) (comZ) [Bacillus sp. ms-22]
MQNEKSMEFLQIAMKYFPQAKEELDKAGVQLDPEALQPLLSLFTSVMQEAYELGRADAESEKATQ

Nucleotide


Download         Length: 198 bp        

>NTDB_id=406445 GPA07_RS14205 WP_008355272.1 2714299..2714496(-) (comZ) [Bacillus sp. ms-22]
ATGCAGAACGAAAAATCGATGGAGTTTTTACAAATTGCGATGAAGTATTTTCCGCAAGCAAAAGAAGAATTAGATAAAGC
AGGGGTTCAGCTTGATCCAGAAGCACTTCAGCCGCTTCTATCATTGTTTACATCTGTCATGCAAGAGGCATATGAGCTTG
GAAGAGCAGATGCAGAATCAGAAAAAGCCACACAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

67.213

93.846

0.631

Multiple sequence alignment