Detailed information
Bioinformatically predicted
Overview
| Name | vicX | Type | Regulator |
| Locus tag | GPA00_RS00540 | Genome accession | NZ_CP046629 |
| Coordinates | 110904..111713 (-) | Length | 269 a.a. |
| NCBI ID | WP_021142843.1 | Uniprot ID | A0A1G9KLS3 |
| Organism | Streptococcus equinus strain CNU G6 | ||
| Function | require for competence development (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 75954..127993 | 110904..111713 | within | 0 |
Gene organization within MGE regions
Location: 75954..127993
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GPA00_RS00340 (GPA00_00340) | - | 76178..76597 (-) | 420 | WP_021142824.1 | DUF948 domain-containing protein | - |
| GPA00_RS00345 (GPA00_00345) | lgt | 76619..77401 (-) | 783 | WP_157327092.1 | prolipoprotein diacylglyceryl transferase | - |
| GPA00_RS00350 (GPA00_00350) | hprK | 77394..78329 (-) | 936 | WP_021142826.1 | HPr(Ser) kinase/phosphatase | - |
| GPA00_RS00355 (GPA00_00355) | - | 78641..78922 (-) | 282 | WP_021142827.1 | PspC domain-containing protein | - |
| GPA00_RS00360 (GPA00_00360) | - | 79019..79456 (-) | 438 | WP_033153081.1 | SprT family protein | - |
| GPA00_RS00365 (GPA00_00365) | - | 79443..81575 (-) | 2133 | WP_157327094.1 | Tex family protein | - |
| GPA00_RS00370 (GPA00_00370) | - | 81762..81896 (+) | 135 | WP_094140269.1 | SPJ_0845 family protein | - |
| GPA00_RS00375 (GPA00_00375) | - | 81902..82807 (+) | 906 | WP_024343740.1 | permease | - |
| GPA00_RS00380 (GPA00_00380) | - | 82804..83616 (+) | 813 | WP_021142833.1 | TIGR03943 family putative permease subunit | - |
| GPA00_RS00385 (GPA00_00385) | - | 83654..83821 (-) | 168 | WP_021142834.1 | hypothetical protein | - |
| GPA00_RS00390 (GPA00_00390) | ftsY | 83827..85149 (-) | 1323 | WP_157327096.1 | signal recognition particle-docking protein FtsY | - |
| GPA00_RS00395 (GPA00_00395) | - | 85190..86011 (-) | 822 | WP_021142837.1 | Cof-type HAD-IIB family hydrolase | - |
| GPA00_RS00400 (GPA00_00400) | - | 86011..86808 (-) | 798 | WP_033153097.1 | Cof-type HAD-IIB family hydrolase | - |
| GPA00_RS00405 (GPA00_00405) | - | 86984..87793 (+) | 810 | WP_157327098.1 | DUF6287 domain-containing protein | - |
| GPA00_RS00410 (GPA00_00410) | - | 87858..88268 (-) | 411 | WP_074639435.1 | NUDIX hydrolase | - |
| GPA00_RS00415 (GPA00_00415) | smc | 88284..91823 (-) | 3540 | WP_157327100.1 | chromosome segregation protein SMC | - |
| GPA00_RS00420 (GPA00_00420) | rnc | 91970..92656 (-) | 687 | WP_021142842.1 | ribonuclease III | - |
| GPA00_RS00425 (GPA00_00425) | - | 93006..94223 (-) | 1218 | WP_001291561.1 | tyrosine-type recombinase/integrase | - |
| GPA00_RS00430 (GPA00_00430) | - | 94305..94508 (-) | 204 | WP_000814511.1 | excisionase | - |
| GPA00_RS09800 (GPA00_00435) | - | 94492..94743 (+) | 252 | WP_001845478.1 | hypothetical protein | - |
| GPA00_RS00440 (GPA00_00440) | - | 94969..95199 (-) | 231 | WP_000857133.1 | helix-turn-helix domain-containing protein | - |
| GPA00_RS00445 (GPA00_00445) | - | 95196..95618 (-) | 423 | WP_000804885.1 | sigma-70 family RNA polymerase sigma factor | - |
| GPA00_RS00455 (GPA00_00455) | - | 96123..96476 (+) | 354 | WP_001227347.1 | helix-turn-helix transcriptional regulator | - |
| GPA00_RS00460 (GPA00_00460) | - | 96536..96703 (-) | 168 | WP_000336323.1 | cysteine-rich KTR domain-containing protein | - |
| GPA00_RS00465 (GPA00_00465) | tet(M) | 96822..98741 (-) | 1920 | WP_157327101.1 | tetracycline resistance ribosomal protection protein Tet(M) | - |
| GPA00_RS09895 | - | 98757..98804 (-) | 48 | Protein_91 | hypothetical protein | - |
| GPA00_RS00475 (GPA00_00475) | - | 99118..100050 (-) | 933 | WP_001224318.1 | conjugal transfer protein | - |
| GPA00_RS00480 (GPA00_00480) | - | 100047..101048 (-) | 1002 | WP_000769868.1 | lysozyme family protein | - |
| GPA00_RS00485 (GPA00_00485) | - | 101045..103222 (-) | 2178 | WP_000804748.1 | CD3337/EF1877 family mobilome membrane protein | - |
| GPA00_RS00490 (GPA00_00490) | - | 103225..105672 (-) | 2448 | WP_157327103.1 | ATP-binding protein | - |
| GPA00_RS00495 (GPA00_00495) | - | 105656..106048 (-) | 393 | WP_000723888.1 | conjugal transfer protein | - |
| GPA00_RS00500 (GPA00_00500) | - | 106137..106634 (-) | 498 | WP_000342539.1 | antirestriction protein ArdA | - |
| GPA00_RS00505 (GPA00_00505) | - | 106751..106972 (-) | 222 | WP_001009056.1 | hypothetical protein | - |
| GPA00_RS00510 (GPA00_00510) | mobT | 107015..108220 (-) | 1206 | WP_000398284.1 | MobT family relaxase | - |
| GPA00_RS00515 (GPA00_00515) | - | 108243..108395 (-) | 153 | WP_000879507.1 | hypothetical protein | - |
| GPA00_RS00520 (GPA00_00520) | - | 108398..109783 (-) | 1386 | WP_000813488.1 | FtsK/SpoIIIE domain-containing protein | - |
| GPA00_RS00525 (GPA00_00525) | - | 109812..110198 (-) | 387 | WP_000985015.1 | YdcP family protein | - |
| GPA00_RS00530 (GPA00_00530) | - | 110214..110528 (-) | 315 | WP_000420682.1 | YdcP family protein | - |
| GPA00_RS00540 (GPA00_00540) | vicX | 110904..111713 (-) | 810 | WP_021142843.1 | MBL fold metallo-hydrolase | Regulator |
| GPA00_RS00545 (GPA00_00545) | vicK | 111714..113066 (-) | 1353 | WP_024343735.1 | cell wall metabolism sensor histidine kinase VicK | Regulator |
| GPA00_RS00550 (GPA00_00550) | vicR | 113059..113769 (-) | 711 | WP_021142846.1 | response regulator YycF | Regulator |
| GPA00_RS00555 (GPA00_00555) | - | 114077..114841 (+) | 765 | WP_024343734.1 | amino acid ABC transporter ATP-binding protein | - |
| GPA00_RS00560 (GPA00_00560) | - | 114846..115655 (+) | 810 | WP_157327105.1 | transporter substrate-binding domain-containing protein | - |
| GPA00_RS00565 (GPA00_00565) | - | 115671..116375 (+) | 705 | WP_039698014.1 | amino acid ABC transporter permease | - |
| GPA00_RS00570 (GPA00_00570) | - | 116385..117032 (+) | 648 | WP_004232801.1 | amino acid ABC transporter permease | - |
| GPA00_RS00575 (GPA00_00575) | - | 117064..117672 (-) | 609 | WP_074450680.1 | TVP38/TMEM64 family protein | - |
| GPA00_RS00580 (GPA00_00580) | - | 117890..118186 (-) | 297 | WP_045797684.1 | hypothetical protein | - |
| GPA00_RS00585 (GPA00_00585) | - | 118370..119860 (-) | 1491 | WP_157328499.1 | sensor histidine kinase | - |
| GPA00_RS00590 (GPA00_00590) | - | 119832..120524 (-) | 693 | WP_024343730.1 | response regulator transcription factor | - |
| GPA00_RS00595 (GPA00_00595) | - | 120613..121494 (-) | 882 | WP_157327107.1 | DUF3114 domain-containing protein | - |
| GPA00_RS00600 (GPA00_00600) | - | 121576..122094 (+) | 519 | WP_021142857.1 | TetR/AcrR family transcriptional regulator | - |
| GPA00_RS00605 (GPA00_00605) | - | 122209..123978 (+) | 1770 | WP_157327109.1 | oleate hydratase | - |
| GPA00_RS09805 | - | 124043..124879 (-) | 837 | WP_232524212.1 | pectate lyase | - |
| GPA00_RS09810 | - | 124940..125941 (-) | 1002 | WP_232524214.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 269 a.a. Molecular weight: 30229.07 Da Isoelectric Point: 5.1978
>NTDB_id=406266 GPA00_RS00540 WP_021142843.1 110904..111713(-) (vicX) [Streptococcus equinus strain CNU G6]
MSENAFKYSVLASGSTGNSFYVETPQKRLLIDAGLTGKKITSLLADIDRKPEDLDAILITHEHSDHIKGVGVLARRYNLD
VYANEKTWQMIDERNMIGKLDTAQKHVFERGKVLTFGDIDIESFGVSHDAVDPQFYRLMKDNKSFVVLTDTGYVSDRMAG
VIENADGYLIESNHDVEILRAGSYPWSLKQRILSDRGHLSNEDGADTMIRTIGNRTKKIYLGHLSKENNIKELAHMTMEN
NLMQADFAVGHDMTVFDTSPDEATPLTEI
MSENAFKYSVLASGSTGNSFYVETPQKRLLIDAGLTGKKITSLLADIDRKPEDLDAILITHEHSDHIKGVGVLARRYNLD
VYANEKTWQMIDERNMIGKLDTAQKHVFERGKVLTFGDIDIESFGVSHDAVDPQFYRLMKDNKSFVVLTDTGYVSDRMAG
VIENADGYLIESNHDVEILRAGSYPWSLKQRILSDRGHLSNEDGADTMIRTIGNRTKKIYLGHLSKENNIKELAHMTMEN
NLMQADFAVGHDMTVFDTSPDEATPLTEI
Nucleotide
Download Length: 810 bp
>NTDB_id=406266 GPA00_RS00540 WP_021142843.1 110904..111713(-) (vicX) [Streptococcus equinus strain CNU G6]
ATGTCTGAGAATGCTTTTAAATATAGTGTCTTAGCTTCCGGTTCTACTGGTAACTCATTTTATGTGGAAACACCACAAAA
ACGTCTTTTGATTGATGCAGGGTTGACTGGTAAGAAAATTACCAGTCTTCTTGCTGATATTGATCGAAAACCAGAAGATT
TGGATGCTATTTTAATTACACACGAACATTCCGACCATATTAAGGGTGTTGGAGTGCTTGCTCGTCGTTACAATCTTGAT
GTTTATGCCAATGAAAAAACTTGGCAAATGATTGATGAGCGCAATATGATTGGAAAACTTGACACTGCTCAGAAACATGT
TTTTGAGCGTGGTAAAGTATTGACTTTCGGTGATATTGATATTGAAAGTTTCGGAGTTAGCCACGATGCGGTTGATCCAC
AATTTTACCGTTTGATGAAAGATAACAAATCATTTGTTGTTTTGACTGATACGGGCTATGTTAGTGATAGAATGGCTGGC
GTCATTGAAAATGCAGATGGCTATTTGATTGAGTCAAATCACGATGTTGAGATATTGCGTGCGGGTTCTTATCCATGGAG
CTTAAAACAACGTATCTTATCTGATAGAGGGCATTTATCAAATGAAGATGGTGCAGATACGATGATTCGCACCATTGGTA
ATCGTACGAAAAAAATCTATCTTGGTCACTTGAGTAAGGAAAATAATATCAAAGAACTAGCTCACATGACTATGGAAAAT
AATTTGATGCAAGCTGATTTTGCGGTTGGACACGATATGACTGTCTTTGATACGTCACCGGATGAAGCAACGCCATTAAC
TGAAATCTAA
ATGTCTGAGAATGCTTTTAAATATAGTGTCTTAGCTTCCGGTTCTACTGGTAACTCATTTTATGTGGAAACACCACAAAA
ACGTCTTTTGATTGATGCAGGGTTGACTGGTAAGAAAATTACCAGTCTTCTTGCTGATATTGATCGAAAACCAGAAGATT
TGGATGCTATTTTAATTACACACGAACATTCCGACCATATTAAGGGTGTTGGAGTGCTTGCTCGTCGTTACAATCTTGAT
GTTTATGCCAATGAAAAAACTTGGCAAATGATTGATGAGCGCAATATGATTGGAAAACTTGACACTGCTCAGAAACATGT
TTTTGAGCGTGGTAAAGTATTGACTTTCGGTGATATTGATATTGAAAGTTTCGGAGTTAGCCACGATGCGGTTGATCCAC
AATTTTACCGTTTGATGAAAGATAACAAATCATTTGTTGTTTTGACTGATACGGGCTATGTTAGTGATAGAATGGCTGGC
GTCATTGAAAATGCAGATGGCTATTTGATTGAGTCAAATCACGATGTTGAGATATTGCGTGCGGGTTCTTATCCATGGAG
CTTAAAACAACGTATCTTATCTGATAGAGGGCATTTATCAAATGAAGATGGTGCAGATACGATGATTCGCACCATTGGTA
ATCGTACGAAAAAAATCTATCTTGGTCACTTGAGTAAGGAAAATAATATCAAAGAACTAGCTCACATGACTATGGAAAAT
AATTTGATGCAAGCTGATTTTGCGGTTGGACACGATATGACTGTCTTTGATACGTCACCGGATGAAGCAACGCCATTAAC
TGAAATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| vicX | Streptococcus mutans UA159 |
76.208 |
100 |
0.762 |