Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   GO596_RS01070 Genome accession   NZ_CP046628
Coordinates   215629..216354 (-) Length   241 a.a.
NCBI ID   WP_157339070.1    Uniprot ID   -
Organism   Streptococcus equinus strain CNU 77-23     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 210629..221354
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GO596_RS01040 (GO596_01040) - 210654..211721 (-) 1068 WP_157328517.1 bifunctional glycosyltransferase family 2/GtrA family protein -
  GO596_RS01045 (GO596_01045) - 211727..212752 (-) 1026 WP_157327720.1 sensor domain-containing diguanylate cyclase -
  GO596_RS01055 (GO596_01055) trmB 213087..213725 (-) 639 WP_021141720.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  GO596_RS01060 (GO596_01060) ccrZ 213725..214522 (-) 798 WP_413083587.1 cell cycle regulator CcrZ -
  GO596_RS01065 (GO596_01065) - 214592..215626 (-) 1035 WP_157339069.1 ABC transporter permease -
  GO596_RS01070 (GO596_01070) pptA 215629..216354 (-) 726 WP_157339070.1 ABC transporter ATP-binding protein Regulator
  GO596_RS01075 (GO596_01075) - 216418..216837 (+) 420 WP_157339071.1 HIT family protein -
  GO596_RS01080 (GO596_01080) - 216834..217148 (+) 315 WP_021141714.1 hypothetical protein -
  GO596_RS01085 (GO596_01085) brpA 217220..218383 (-) 1164 WP_024344602.1 biofilm formation/cell division transcriptional regulator BrpA -
  GO596_RS01090 (GO596_01090) - 218394..218906 (-) 513 WP_074567228.1 GNAT family N-acetyltransferase -
  GO596_RS01095 (GO596_01095) tsaE 218899..219342 (-) 444 WP_024344600.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  GO596_RS01100 (GO596_01100) - 219509..220930 (-) 1422 WP_157339072.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26673.96 Da        Isoelectric Point: 4.6711

>NTDB_id=406213 GO596_RS01070 WP_157339070.1 215629..216354(-) (pptA) [Streptococcus equinus strain CNU 77-23]
MLKIENLTGGYVNIPVLKNISFEVNDGELVGLIGLNGAGKSTTINEIIGLLTPYQGQITLDGLTLANDQADYRKKIGFIP
ETPSLYEELTLREHLENVAMAYDLEFEAAMARANELLKLFRLSDKLDWFPINFSKGMKQKVMIICAFMVNPSLFIVDEPF
LGLDPLAISDLTDLLAQEKAKGKAILMSTHVLDAAEKMCDRFVILHHGQVRAVGNLAELREAFGQKDASLNDIYIALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=406213 GO596_RS01070 WP_157339070.1 215629..216354(-) (pptA) [Streptococcus equinus strain CNU 77-23]
ATGTTAAAAATTGAAAATCTTACAGGTGGATATGTTAATATCCCAGTTTTAAAAAATATTTCTTTTGAAGTAAATGATGG
TGAACTTGTTGGATTAATTGGGCTAAATGGTGCTGGAAAATCAACAACCATCAATGAAATTATTGGACTTTTGACGCCTT
ATCAAGGTCAAATTACGCTAGATGGTTTGACTTTAGCTAATGATCAAGCTGATTATCGTAAAAAAATCGGTTTTATTCCT
GAAACGCCAAGTTTATATGAAGAATTGACTTTGCGTGAGCATTTGGAAAATGTTGCTATGGCTTATGATCTTGAGTTTGA
GGCTGCTATGGCGCGTGCAAATGAGCTGTTAAAACTTTTCCGTCTGTCTGATAAACTTGATTGGTTCCCGATTAATTTTT
CAAAAGGGATGAAGCAAAAGGTCATGATTATTTGTGCTTTCATGGTTAATCCTAGTCTGTTTATTGTCGATGAGCCGTTT
TTAGGATTGGATCCGTTGGCTATTTCTGATTTGACAGATTTGCTTGCGCAAGAAAAAGCAAAAGGTAAGGCTATCTTGAT
GTCAACGCACGTGCTAGATGCTGCTGAAAAAATGTGTGACCGTTTTGTGATTTTGCATCATGGTCAAGTAAGAGCTGTAG
GAAATTTAGCTGAATTGCGAGAAGCTTTCGGTCAGAAAGACGCTAGCTTAAATGATATCTACATAGCTTTGACTAAAGAG
GGATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

79.079

99.17

0.784
  pptA Streptococcus thermophilus LMD-9

77.824

99.17

0.772

Multiple sequence alignment