Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   GO596_RS00510 Genome accession   NZ_CP046628
Coordinates   104409..105494 (-) Length   361 a.a.
NCBI ID   WP_033152147.1    Uniprot ID   -
Organism   Streptococcus equinus strain CNU 77-23     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 99409..110494
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GO596_RS00485 (GO596_00485) - 100403..100912 (-) 510 WP_157339029.1 VanZ family protein -
  GO596_RS00490 (GO596_00490) rlmN 100923..102023 (-) 1101 WP_021141827.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  GO596_RS00495 (GO596_00495) - 102044..102604 (-) 561 WP_074863812.1 YutD family protein -
  GO596_RS00500 (GO596_00500) - 102634..103965 (-) 1332 WP_157339030.1 bifunctional metallophosphatase/5'-nucleotidase -
  GO596_RS00505 (GO596_00505) - 104051..104296 (-) 246 WP_004230665.1 DUF3923 family protein -
  GO596_RS00510 (GO596_00510) sepM 104409..105494 (-) 1086 WP_033152147.1 SepM family pheromone-processing serine protease Regulator
  GO596_RS00515 (GO596_00515) coaD 105472..105969 (-) 498 WP_021141823.1 pantetheine-phosphate adenylyltransferase -
  GO596_RS00520 (GO596_00520) rsmD 106001..106540 (-) 540 WP_157339031.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  GO596_RS00525 (GO596_00525) asnA 106666..107658 (-) 993 WP_021141821.1 aspartate--ammonia ligase -
  GO596_RS00530 (GO596_00530) - 107980..109194 (-) 1215 WP_157339032.1 MFS transporter -
  GO596_RS00535 (GO596_00535) - 109296..110381 (-) 1086 WP_157339033.1 MmcQ/YjbR family DNA-binding protein -

Sequence


Protein


Download         Length: 361 a.a.        Molecular weight: 38892.70 Da        Isoelectric Point: 4.4949

>NTDB_id=406208 GO596_RS00510 WP_033152147.1 104409..105494(-) (sepM) [Streptococcus equinus strain CNU 77-23]
MTILNAFKGILKKIGRILYRLKWWILGIVGTAFIIFSLFCPLGYYVEMPGGAYDVRSVLTVNNKADKEDGSYNFVAVGVS
QATLAQLVYAWLTPHTEITTEAATTGGYSNADYMRINQYYMETSQNTATYQALTLAGKNVSLDYEGVYVLNVDKHSTFKG
LLHLADTVTGVNGKTFNSSAELMAYVADLDLGSDVTVQETSNGKSKEVSGKIIELPNGKNGIGIGLVDHTEVSSDVDVDF
ETSGFGGPSAGLMFTLDIYDQVNNEDLRKGRKIAGTGTINSDGSVGDIGGAGLKVVSAAKAGADVFFVPNNPVDEETKKE
NPDAKTNYQEAKEAAKDLDTDMKIVPVTTVQEAIDYLRSTD

Nucleotide


Download         Length: 1086 bp        

>NTDB_id=406208 GO596_RS00510 WP_033152147.1 104409..105494(-) (sepM) [Streptococcus equinus strain CNU 77-23]
ATGACAATCTTAAACGCATTTAAAGGGATTTTGAAAAAGATAGGTCGTATTTTGTATCGCTTAAAATGGTGGATTTTAGG
TATTGTTGGCACTGCTTTTATTATTTTCAGCCTTTTTTGCCCACTTGGTTATTATGTTGAAATGCCTGGTGGTGCTTATG
ATGTTCGCAGTGTTTTAACGGTTAATAATAAAGCTGATAAAGAAGATGGCTCTTATAATTTTGTAGCTGTTGGGGTTAGT
CAAGCAACGCTTGCTCAGTTGGTTTATGCTTGGTTGACGCCGCACACTGAAATTACAACTGAAGCAGCAACGACTGGTGG
TTACAGCAATGCAGACTATATGCGCATTAACCAATATTATATGGAAACTTCTCAAAATACAGCGACCTATCAAGCACTAA
CTTTGGCAGGAAAGAATGTTAGTTTGGATTATGAAGGTGTGTATGTTTTGAATGTTGATAAGCATTCGACCTTCAAAGGT
CTGTTGCACCTTGCTGATACTGTGACAGGTGTTAACGGTAAAACTTTCAATAGTTCTGCAGAATTAATGGCTTATGTTGC
TGATTTAGATTTGGGTTCTGATGTGACTGTCCAAGAGACTTCTAACGGTAAGAGTAAAGAAGTTTCTGGGAAAATCATTG
AATTGCCAAATGGTAAAAATGGAATTGGTATCGGATTAGTCGACCATACAGAAGTTTCATCAGACGTTGATGTTGATTTT
GAAACGAGCGGTTTTGGCGGACCAAGTGCTGGTTTGATGTTTACTCTAGATATTTACGACCAAGTCAATAATGAAGATTT
GAGAAAAGGTCGTAAGATTGCTGGTACTGGTACGATTAATTCGGATGGTTCAGTTGGTGATATTGGCGGTGCTGGGTTAA
AAGTAGTGTCAGCTGCTAAGGCTGGTGCGGATGTTTTCTTTGTGCCTAATAACCCTGTGGATGAGGAAACGAAAAAAGAA
AATCCAGATGCTAAGACTAACTATCAAGAAGCAAAAGAAGCTGCTAAAGATTTAGATACTGACATGAAGATTGTTCCTGT
GACAACTGTTCAGGAAGCAATTGATTATTTGCGTAGCACAGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

66.667

93.906

0.626


Multiple sequence alignment