Detailed information NTG0406171

Bioinformatically predicted

Overview

• Name: rcrQ
• Type: Regulator
• Locus tag: GO995_RS05645
• Genome accession: NZ_CP046624
• Coordinates: 1111887..1113659 (-)
• Length: 590 a.a.
• NCBI ID: WP_157629108.1
• Uniprot ID: -
• Organism: Streptococcus ruminicola strain CNU_G3
• Function: regulate competence (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	1108344..1129240	1111887..1113659	within	0

Gene organization within MGE regions

Location: 1108344..1129240

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GO995_RS05625 (GO995_05625)	-	1108344..1109189 (+)	846	WP_157629105.1	aldo/keto reductase	-
GO995_RS05630 (GO995_05630)	-	1109234..1110460 (-)	1227	WP_157629106.1	sensor histidine kinase	-
GO995_RS05635 (GO995_05635)	-	1110469..1111149 (-)	681	WP_157629107.1	response regulator transcription factor	-
GO995_RS05640 (GO995_05640)	-	1111152..1111787 (-)	636	WP_074799202.1	GTP pyrophosphokinase	-
GO995_RS05645 (GO995_05645)	rcrQ	1111887..1113659 (-)	1773	WP_157629108.1	ABC transporter ATP-binding protein	Regulator
GO995_RS05650 (GO995_05650)	rcrP	1113649..1115463 (-)	1815	WP_074563880.1	ABC transporter ATP-binding protein	Regulator
GO995_RS05655 (GO995_05655)	rcrR	1115467..1115907 (-)	441	WP_157629109.1	MarR family winged helix-turn-helix transcriptional regulator	Regulator
GO995_RS05660 (GO995_05660)	-	1116051..1116461 (-)	411	WP_157629110.1	peptide deformylase	-
GO995_RS05665 (GO995_05665)	-	1116458..1116967 (-)	510	WP_157629111.1	GNAT family N-acetyltransferase	-
GO995_RS05670 (GO995_05670)	gdhA	1117124..1118473 (-)	1350	WP_157629112.1	NADP-specific glutamate dehydrogenase	-
GO995_RS05675 (GO995_05675)	-	1118710..1119207 (+)	498	WP_039696754.1	DUF308 domain-containing protein	-
GO995_RS05680 (GO995_05680)	queF	1119244..1119735 (-)	492	WP_039696752.1	preQ(1) synthase	-
GO995_RS05685 (GO995_05685)	queE	1119884..1120597 (-)	714	WP_157629113.1	7-carboxy-7-deazaguanine synthase QueE	-
GO995_RS05690 (GO995_05690)	queD	1120590..1121036 (-)	447	WP_157629114.1	6-carboxytetrahydropterin synthase QueD	-
GO995_RS05695 (GO995_05695)	queC	1121036..1121686 (-)	651	WP_157629115.1	7-cyano-7-deazaguanine synthase QueC	-
GO995_RS05700 (GO995_05700)	-	1121853..1123622 (-)	1770	WP_157629116.1	ABC transporter ATP-binding protein	-
GO995_RS05705 (GO995_05705)	-	1123625..1125364 (-)	1740	WP_157629117.1	ABC transporter ATP-binding protein	-
GO995_RS05710 (GO995_05710)	-	1125406..1127274 (-)	1869	WP_074563896.1	ABC-F family ATP-binding cassette domain-containing protein	-
GO995_RS05715 (GO995_05715)	-	1127271..1128476 (-)	1206	WP_039696743.1	CCA tRNA nucleotidyltransferase	-
GO995_RS05720 (GO995_05720)	dapB	1128473..1129240 (-)	768	WP_074626670.1	4-hydroxy-tetrahydrodipicolinate reductase	-

Sequence

Protein

• Length: 590 a.a.
• Molecular weight: 65330.47 Da
• Isoelectric Point: 5.0497

>NTDB_id=406171 GO995_RS05645 WP_157629108.1 1111887..1113659(-) (rcrQ) [Streptococcus ruminicola strain CNU_G3]
MENKKKVSFYGRMKPYIKGFQFPFILAVIGAIISATVTVIGPDKLKEITNTIMKGLTPTKMGTIPGVDLDKVGQIALTLA
ILYVISAVVGYIQNFTVATIVQRFSQRLRAAIQVKIDRVPLNYFDSHSQGDTLSRVTNDVDLLGQSLNQSLGTLVTSVVL
LIGSIFMMFHSNVSMALTAIGSVFIGFLLVVVIMGSSQPLFKRQQNNLAAVNGYVEEIYSGHNVVTSYNASEETSEAFKK
LNTNLYKSMWQSQFLSGIMMPLMIFIGNFGYVMVCVVGAVKVINGDITMGDVVAFMTYVRIFSQPLSQIAQAFTQMQSAT
AAMSRVFEFLEEEEMEDESHKERQLSDVKGEVTFDNVFFGYSKDKTIIHDFSAVAKPGQKVAIVGPTGAGKTTIVNLLMK
FYEIDKGQIAIDGVDTRLMSREEVHDQFSMVLQDTWLFEGTIKENLIYNQENITDEQVVAAAKAVGVHHFIMTLPDGYDT
YLDDSVTLSIGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIKNADLILVMKD
GNIIEQGNHDELMTEGGFYADLYNSQFEVA

Nucleotide

• Length: 1773 bp

>NTDB_id=406171 GO995_RS05645 WP_157629108.1 1111887..1113659(-) (rcrQ) [Streptococcus ruminicola strain CNU_G3]
ATGGAAAATAAGAAAAAAGTATCCTTCTATGGCAGAATGAAGCCATACATTAAAGGTTTCCAATTTCCATTTATCCTTGC
GGTAATTGGAGCCATAATCTCAGCGACTGTTACTGTTATCGGTCCTGATAAATTAAAAGAAATTACAAATACCATTATGA
AAGGTTTGACACCAACTAAAATGGGGACTATCCCTGGTGTTGACCTAGATAAGGTTGGACAAATTGCTTTAACCCTTGCC
ATTTTATATGTGATTTCTGCAGTTGTTGGTTACATTCAAAACTTTACAGTAGCTACCATCGTTCAACGTTTCTCTCAACG
TTTGCGTGCAGCTATCCAAGTTAAAATTGACCGTGTGCCGCTAAATTATTTTGACAGTCATTCACAAGGGGATACCCTTT
CTCGTGTAACAAATGACGTGGATTTGCTTGGTCAATCTCTTAACCAAAGTTTGGGAACATTGGTCACTTCAGTAGTGCTT
TTGATTGGTTCGATTTTCATGATGTTCCATTCAAATGTCAGCATGGCGCTAACAGCAATTGGGTCAGTCTTTATCGGATT
CTTGCTAGTTGTTGTGATTATGGGGTCATCTCAACCCTTATTCAAACGCCAACAAAATAACTTGGCAGCAGTCAATGGTT
ATGTCGAAGAAATTTATTCTGGTCACAATGTGGTGACAAGCTACAACGCATCTGAAGAAACAAGTGAAGCCTTTAAGAAA
CTAAATACAAATCTTTACAAATCAATGTGGCAATCACAATTCTTATCAGGTATTATGATGCCACTCATGATTTTCATTGG
TAACTTTGGTTATGTTATGGTCTGTGTGGTTGGTGCAGTTAAGGTGATTAATGGCGATATTACCATGGGTGATGTGGTTG
CCTTTATGACTTACGTGCGCATTTTCTCACAACCTCTTTCTCAAATCGCTCAAGCCTTCACACAAATGCAATCAGCAACG
GCTGCTATGAGTCGAGTCTTTGAATTTCTTGAAGAAGAGGAAATGGAAGATGAATCACACAAAGAACGTCAATTGTCTGA
TGTTAAAGGTGAAGTTACCTTTGATAATGTCTTCTTTGGTTATTCTAAAGATAAAACCATTATCCATGATTTCTCTGCCG
TGGCAAAACCTGGTCAAAAGGTTGCTATCGTTGGACCAACTGGTGCTGGTAAGACAACCATCGTTAACCTTCTTATGAAA
TTCTATGAAATTGATAAAGGTCAAATTGCTATCGATGGTGTTGACACACGTTTGATGTCTCGAGAAGAAGTTCATGACCA
ATTCTCAATGGTGCTTCAGGATACTTGGCTCTTTGAAGGAACCATCAAAGAAAACTTGATTTATAACCAAGAAAATATCA
CTGATGAACAAGTAGTAGCAGCAGCTAAAGCAGTTGGTGTTCACCACTTTATCATGACGCTTCCTGATGGCTATGACACA
TACCTTGATGATTCTGTTACCCTTTCAATCGGTCAAAAACAACTCTTGACTATTGCGCGTGCCCTCTTGAAAGATGCTCC
GCTTCTTATTCTAGATGAAGCAACATCATCAGTCGATACACGTACGGAAGAATTGATTCAAAAAGCTATGGATAAATTGA
TGGAAGGTCGTACCTCATTTGTCATTGCTCACCGTTTATCAACGATTAAAAATGCTGACTTAATCCTTGTCATGAAAGAT
GGTAACATCATCGAACAAGGTAATCATGATGAATTGATGACAGAAGGTGGCTTCTATGCTGACCTTTACAACTCACAATT
TGAAGTAGCCTAA

Domains

Predicted by InterproScan.

• ABC transporter transmembrane region (ABC_membrane) (25-306)

• ABC transporter (ABC_tran) (370-516)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rcrQ	Streptococcus mutans UA159	72.973	100	0.732