Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   GO995_RS02165 Genome accession   NZ_CP046624
Coordinates   394247..394972 (+) Length   241 a.a.
NCBI ID   WP_157628739.1    Uniprot ID   -
Organism   Streptococcus ruminicola strain CNU_G3     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 389247..399972
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GO995_RS02135 (GO995_02135) - 389647..391068 (+) 1422 WP_074603728.1 NCS2 family permease -
  GO995_RS02140 (GO995_02140) tsaE 391244..391687 (+) 444 WP_074561333.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  GO995_RS02145 (GO995_02145) - 391680..392192 (+) 513 WP_074565147.1 GNAT family N-acetyltransferase -
  GO995_RS02150 (GO995_02150) brpA 392203..393375 (+) 1173 WP_157628737.1 biofilm formation/cell division transcriptional regulator BrpA -
  GO995_RS02155 (GO995_02155) - 393462..393767 (-) 306 WP_157628738.1 hypothetical protein -
  GO995_RS02160 (GO995_02160) - 393764..394183 (-) 420 WP_074565143.1 HIT family protein -
  GO995_RS02165 (GO995_02165) pptA 394247..394972 (+) 726 WP_157628739.1 ABC transporter ATP-binding protein Regulator
  GO995_RS02170 (GO995_02170) - 394975..396009 (+) 1035 WP_157628740.1 ABC transporter permease -
  GO995_RS02175 (GO995_02175) ccrZ 396062..396883 (+) 822 WP_039695962.1 cell cycle regulator CcrZ -
  GO995_RS02180 (GO995_02180) trmB 396883..397521 (+) 639 WP_157628741.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  GO995_RS02185 (GO995_02185) - 397866..398891 (+) 1026 WP_157628742.1 sensor domain-containing diguanylate cyclase -
  GO995_RS02190 (GO995_02190) - 398897..399936 (+) 1040 Protein_366 glycosyltransferase -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26763.18 Da        Isoelectric Point: 4.7909

>NTDB_id=406154 GO995_RS02165 WP_157628739.1 394247..394972(+) (pptA) [Streptococcus ruminicola strain CNU_G3]
MLKIENVTGGYINIPVLKNISFEVGDGELVGLIGLNGAGKSTTINEVIGLLTPYQGKITLDGLTLADNQAEYRKKIGFIP
ETPSLYEELTLREHLETVAMAYDLDFDEAMARAKELLKLFRLSDKLEWFPINFSKGMKQKVMIVCAFMIDPHLFIVDEPF
LGLDPLAISDLTDLLAQEKAKGKAILMSTHVLDAAEKMCDRFVILHHGQVRAMGNLAELRQAFGKEDASLNDIYMALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=406154 GO995_RS02165 WP_157628739.1 394247..394972(+) (pptA) [Streptococcus ruminicola strain CNU_G3]
ATGTTAAAAATTGAAAATGTCACAGGTGGATACATTAATATCCCTGTTTTAAAAAATATTTCTTTTGAAGTTGGTGACGG
TGAGTTGGTCGGCTTGATTGGGCTAAATGGTGCTGGGAAATCAACGACGATTAATGAAGTTATCGGACTTTTGACACCTT
ATCAAGGAAAGATTACGCTTGACGGCTTGACTTTGGCTGATAACCAAGCAGAGTATCGCAAAAAGATTGGCTTTATTCCT
GAAACGCCAAGTTTATATGAAGAGTTAACTTTACGTGAGCATTTAGAGACGGTTGCTATGGCTTATGACCTTGATTTTGA
TGAGGCGATGGCGCGTGCCAAGGAATTGCTAAAACTTTTCCGTTTGTCTGATAAGCTTGAGTGGTTCCCGATTAATTTTT
CAAAGGGGATGAAGCAAAAGGTTATGATTGTCTGCGCCTTTATGATTGATCCTCATTTGTTTATCGTTGATGAGCCATTT
TTGGGGCTAGATCCTTTGGCGATTTCTGATTTGACGGATTTGCTAGCGCAGGAAAAAGCAAAAGGCAAAGCTATTTTGAT
GTCAACACACGTGCTAGATGCTGCTGAAAAAATGTGTGATCGATTTGTGATTTTGCATCATGGTCAAGTGCGTGCAATGG
GAAATCTAGCTGAATTGCGTCAAGCTTTTGGAAAAGAAGATGCTAGTTTGAACGATATTTACATGGCTTTAACTAAAGAG
GGATAG

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

78.243

99.17

0.776
  pptA Streptococcus thermophilus LMD-9

76.987

99.17

0.763

Multiple sequence alignment