Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   SSUJS14_RS07755 Genome accession   NC_017618
Coordinates   1557706..1558395 (-) Length   229 a.a.
NCBI ID   WP_014636478.1    Uniprot ID   -
Organism   Streptococcus suis JS14     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1552706..1563395
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SSUJS14_RS07740 (SSUJS14_1561) - 1554250..1555008 (-) 759 WP_012027523.1 ABC transporter ATP-binding protein -
  SSUJS14_RS07745 (SSUJS14_1562) - 1555104..1556096 (-) 993 WP_012027524.1 sensor histidine kinase -
  SSUJS14_RS10920 (SSUJS14_1563) - 1556089..1556217 (-) 129 Protein_1468 winged helix-turn-helix domain-containing protein -
  SSUJS14_RS07750 (SSUJS14_1564) - 1556461..1557663 (+) 1203 WP_012775158.1 IS110 family transposase -
  SSUJS14_RS07755 (SSUJS14_1565) braR 1557706..1558395 (-) 690 WP_014636478.1 response regulator transcription factor Regulator
  SSUJS14_RS07760 (SSUJS14_1566) - 1558565..1559746 (+) 1182 WP_012027526.1 DUF2974 domain-containing protein -
  SSUJS14_RS07765 (SSUJS14_1567) - 1559761..1560885 (-) 1125 WP_012027527.1 aminotransferase -
  SSUJS14_RS07770 (SSUJS14_1568) - 1561032..1561793 (-) 762 WP_012027528.1 nuclear transport factor 2 family protein -
  SSUJS14_RS07775 (SSUJS14_1569) - 1561803..1563314 (-) 1512 WP_012027529.1 ABC transporter permease/substrate-binding protein -

Sequence

Protein


Download         Length: 229 a.a.        Molecular weight: 27116.67 Da        Isoelectric Point: 5.7208

>NTDB_id=40607 SSUJS14_RS07755 WP_014636478.1 1557706..1558395(-) (braR) [Streptococcus suis JS14]
MQKILLIEDDKTISQLVAKNLINWGYQVQEVKDFQMVLEQMEEFQPHLILLDIGLPFFNGYYWCQEIRKTSRVPIMFLSS
HDQPMDIVMAINMGADDYVTKPFEMTVLLAKIQGLLRRTYDFVGEQSLLWFEEISLDLKTMQVSYGQVVEELTRNEFQIL
RVLFEHGKEVVSREELMRELWNSDIFYHLSSSSRYLTKNILCLVIQIRKLFYFGLKLRVKSAYKTNTLC

Nucleotide


Download         Length: 690 bp        

>NTDB_id=40607 SSUJS14_RS07755 WP_014636478.1 1557706..1558395(-) (braR) [Streptococcus suis JS14]
ATGCAGAAAATTCTTCTTATCGAGGATGATAAAACGATTAGCCAACTAGTTGCTAAAAACTTGATAAACTGGGGTTACCA
GGTGCAAGAGGTCAAGGATTTTCAGATGGTTTTGGAACAGATGGAAGAGTTTCAGCCCCATTTGATTTTACTGGATATTG
GTCTGCCGTTTTTCAATGGCTATTACTGGTGTCAGGAAATTCGCAAGACATCCCGTGTGCCCATTATGTTTCTGTCTTCC
CATGACCAGCCAATGGATATTGTTATGGCGATCAATATGGGGGCGGATGACTATGTGACCAAGCCCTTTGAAATGACGGT
TCTCCTGGCCAAAATACAGGGGCTTCTTAGAAGAACCTATGACTTTGTCGGAGAACAAAGTTTACTCTGGTTTGAGGAGA
TTTCCCTAGACCTAAAGACCATGCAGGTGTCCTATGGACAGGTTGTGGAAGAGCTGACGCGAAATGAATTTCAGATTTTA
CGCGTTTTATTTGAACATGGCAAGGAAGTGGTCAGCCGTGAGGAGCTGATGAGAGAACTCTGGAACAGTGATATTTTCTA
CCATTTGTCAAGTTCATCAAGGTATTTGACGAAAAATATTTTGTGTCTCGTCATCCAAATAAGGAAATTGTTTTATTTTG
GACTAAAGTTACGTGTAAAAAGTGCATACAAAACCAACACCTTATGTTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(151-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

42.857

85.59

0.367

Multiple sequence alignment