Detailed information NTG0406034

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: HZF20_RS15240
• Genome accession: NZ_CP058618
• Coordinates: 3170553..3171536 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain JS316
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3165553..3176536

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HZF20_RS15225 (HZF20_15195)	dppA	3166696..3168303 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
HZF20_RS15230 (HZF20_15200)	dppB	3168611..3169630 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
HZF20_RS15235 (HZF20_15205)	dppC	3169640..3170542 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
HZF20_RS15240 (HZF20_15210)	amiE	3170553..3171536 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
HZF20_RS15245 (HZF20_15215)	dppF	3171533..3172537 (+)	1005	WP_000107031.1	dipeptide ABC transporter ATP-binding subunit DppF	-
HZF20_RS15250 (HZF20_15220)	yhjV	3172567..3173838 (-)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
HZF20_RS15255 (HZF20_15225)	-	3174314..3174421 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
HZF20_RS15260 (HZF20_15230)	-	3174797..3174904 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
HZF20_RS15265 (HZF20_15235)	-	3175280..3175387 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
HZF20_RS15270 (HZF20_15240)	-	3175763..3175870 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=406034 HZF20_RS15240 WP_001196486.1 3170553..3171536(+) (amiE) [Escherichia coli strain JS316]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=406034 HZF20_RS15240 WP_001196486.1 3170553..3171536(+) (amiE) [Escherichia coli strain JS316]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATCATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGTAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404