Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   GO005_RS21195 Genome accession   NZ_CP046592
Coordinates   445161..445301 (+) Length   46 a.a.
NCBI ID   WP_250620046.1    Uniprot ID   -
Organism   Bacillus subtilis strain TR21     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 440161..450301
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GO005_RS21190 srfAB 442028..445117 (+) 3090 Protein_427 surfactin non-ribosomal peptide synthetase SrfAB -
  GO005_RS21195 comS 445161..445301 (+) 141 WP_250620046.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5244.09 Da        Isoelectric Point: 9.8310

>NTDB_id=405914 GO005_RS21195 WP_250620046.1 445161..445301(+) (comS) [Bacillus subtilis strain TR21]
MNRSGKHLISSIILYPRPSGECISSISLDKKTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=405914 GO005_RS21195 WP_250620046.1 445161..445301(+) (comS) [Bacillus subtilis strain TR21]
TTGAACCGATCAGGCAAGCATCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGAAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

97.826

100

0.978

Multiple sequence alignment