Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   GO004_RS21825 Genome accession   NZ_CP046591
Coordinates   2294596..2294736 (-) Length   46 a.a.
NCBI ID   WP_010886404.1    Uniprot ID   A0AAX3RTW8
Organism   Bacillus subtilis strain R31     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2289596..2299736
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GO004_RS21820 - 2293478..2294650 (-) 1173 Protein_2388 condensation domain-containing protein -
  GO004_RS21825 comS 2294596..2294736 (-) 141 WP_010886404.1 competence protein ComS Regulator
  GO004_RS21830 srfAB 2294828..2297869 (-) 3042 Protein_2390 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5244.05 Da        Isoelectric Point: 9.2422

>NTDB_id=405836 GO004_RS21825 WP_010886404.1 2294596..2294736(-) (comS) [Bacillus subtilis strain R31]
MNRSGKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=405836 GO004_RS21825 WP_010886404.1 2294596..2294736(-) (comS) [Bacillus subtilis strain R31]
TTGAACCGATCAGGCAAGCATCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment