Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   GO004_RS15905 Genome accession   NZ_CP046591
Coordinates   3054206..3054325 (-) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain R31     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3049206..3059325
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GO004_RS15875 (GO004_15865) - 3049862..3050422 (-) 561 WP_015714897.1 hypothetical protein -
  GO004_RS15880 (GO004_15870) - 3050415..3051062 (-) 648 WP_015714896.1 ABC transporter ATP-binding protein -
  GO004_RS15885 (GO004_15875) - 3051065..3051862 (-) 798 WP_231573542.1 hypothetical protein -
  GO004_RS15890 (GO004_15880) - 3051872..3052546 (-) 675 WP_015714894.1 hypothetical protein -
  GO004_RS15895 (GO004_15885) - 3052533..3053321 (-) 789 WP_015714893.1 membrane protein -
  GO004_RS15900 (GO004_15890) - 3053470..3053949 (-) 480 WP_015714892.1 hypothetical protein -
  GO004_RS15905 (GO004_15895) phrF 3054206..3054325 (-) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  GO004_RS15910 (GO004_15900) rapF 3054309..3055454 (-) 1146 WP_015714890.1 response regulator aspartate phosphatase RapF Regulator
  GO004_RS21970 (GO004_15905) - 3055457..3055687 (+) 231 WP_015714889.1 hypothetical protein -
  GO004_RS15915 (GO004_15910) ywhK 3055684..3057039 (+) 1356 WP_195727704.1 YncE family protein -
  GO004_RS15920 (GO004_15915) ywhL 3057078..3058454 (+) 1377 WP_003244415.1 YncE family protein -
  GO004_RS15925 (GO004_15920) albG 3058460..3059161 (-) 702 WP_195727705.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=405814 GO004_RS15905 WP_009968329.1 3054206..3054325(-) (phrF) [Bacillus subtilis strain R31]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=405814 GO004_RS15905 WP_009968329.1 3054206..3054325(-) (phrF) [Bacillus subtilis strain R31]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment