Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   GO004_RS06450 Genome accession   NZ_CP046591
Coordinates   1218713..1219297 (-) Length   194 a.a.
NCBI ID   WP_014113628.1    Uniprot ID   A0A0D1L215
Organism   Bacillus subtilis strain R31     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1213713..1224297
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GO004_RS06425 (GO004_06395) mobB 1214109..1214630 (-) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  GO004_RS06430 (GO004_06400) glp 1214591..1215883 (-) 1293 WP_015715810.1 gephyrin-like molybdotransferase Glp -
  GO004_RS06435 (GO004_06405) moeB 1215901..1216920 (-) 1020 WP_015715809.1 molybdopterin-synthase adenylyltransferase MoeB -
  GO004_RS06440 (GO004_06410) mobA 1216971..1217570 (-) 600 WP_015715808.1 molybdenum cofactor guanylyltransferase -
  GO004_RS06445 (GO004_06415) cse15 1217707..1218672 (+) 966 WP_015715807.1 spore protein Cse15 -
  GO004_RS06450 (GO004_06420) rok 1218713..1219297 (-) 585 WP_014113628.1 transcriptional regulator Rok Regulator
  GO004_RS06455 (GO004_06425) ykuV 1219763..1220209 (-) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  GO004_RS06460 (GO004_06430) ahpA 1220281..1220823 (-) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  GO004_RS06465 (GO004_06435) mscT 1221060..1221863 (+) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  GO004_RS06470 (GO004_06440) ykuS 1221900..1222145 (-) 246 WP_003232382.1 YkuS family protein -
  GO004_RS06475 (GO004_06445) dapI 1222207..1223331 (-) 1125 WP_003232383.1 N-acetyldiaminopimelate deacetylase -
  GO004_RS06480 (GO004_06450) dapD 1223401..1224111 (-) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22127.12 Da        Isoelectric Point: 9.7036

>NTDB_id=405780 GO004_RS06450 WP_014113628.1 1218713..1219297(-) (rok) [Bacillus subtilis strain R31]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESAESANE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=405780 GO004_RS06450 WP_014113628.1 1218713..1219297(-) (rok) [Bacillus subtilis strain R31]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCTGAATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1L215

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

97.423

0.974

Multiple sequence alignment