Detailed information NTG0405725

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: HYE75_RS01205
• Genome accession: NZ_CP058596
• Coordinates: 247138..248121 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain UPEC_U013
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 242138..253121

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HYE75_RS01185 (HYE75_01180)	dppA	243282..244889 (+)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-
HYE75_RS01190 (HYE75_01185)	-	244951..245178 (-)	228	WP_000198577.1	hypothetical protein	-
HYE75_RS01195 (HYE75_01190)	dppB	245196..246215 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
HYE75_RS01200 (HYE75_01195)	dppC	246225..247127 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
HYE75_RS01205 (HYE75_01200)	amiE	247138..248121 (+)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
HYE75_RS01210 (HYE75_01205)	dppF	248118..249122 (+)	1005	WP_000103580.1	dipeptide ABC transporter ATP-binding subunit DppF	-
HYE75_RS01215 (HYE75_01210)	yhjV	249152..250423 (-)	1272	WP_021546662.1	aromatic amino acid transport family protein	-
HYE75_RS01220 (HYE75_01215)	-	250899..251006 (+)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
HYE75_RS01225 (HYE75_01220)	-	251382..251489 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=405725 HYE75_RS01205 WP_001196477.1 247138..248121(+) (amiE) [Escherichia coli strain UPEC_U013]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=405725 HYE75_RS01205 WP_001196477.1 247138..248121(+) (amiE) [Escherichia coli strain UPEC_U013]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCAATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAAGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404