Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   GOC52_RS15710 Genome accession   NZ_CP046588
Coordinates   3426111..3426512 (-) Length   133 a.a.
NCBI ID   WP_005418455.1    Uniprot ID   -
Organism   Stenotrophomonas sp. SXG-1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3421111..3431512
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GOC52_RS15695 - 3423122..3425158 (-) 2037 WP_191849837.1 methyl-accepting chemotaxis protein -
  GOC52_RS15700 - 3425200..3425730 (-) 531 WP_171955128.1 chemotaxis protein CheW -
  GOC52_RS15705 - 3425730..3426092 (-) 363 WP_005410717.1 response regulator -
  GOC52_RS15710 pilG 3426111..3426512 (-) 402 WP_005418455.1 twitching motility response regulator PilG Regulator
  GOC52_RS15715 gshB 3426753..3427700 (+) 948 WP_012511876.1 glutathione synthase -
  GOC52_RS15720 - 3427700..3428584 (+) 885 WP_191849839.1 energy transducer TonB -
  GOC52_RS15725 tsaB 3429158..3429871 (-) 714 WP_143994928.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14657.98 Da        Isoelectric Point: 6.3483

>NTDB_id=405699 GOC52_RS15710 WP_005418455.1 3426111..3426512(-) (pilG) [Stenotrophomonas sp. SXG-1]
MTENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=405699 GOC52_RS15710 WP_005418455.1 3426111..3426512(-) (pilG) [Stenotrophomonas sp. SXG-1]
ATGACTGAAAACACGACTGCGGGCGGGGAACTCGCAGGACTCCGGGTGATGGTCATCGATGATTCGAAGACCATCCGCAG
GACTGCGGAAACGCTGCTCAAGCGCGAAGGCTGCGAGGTGGTCACCGCCACCGACGGCTTCGAAGCGCTTGCGAAGATCG
CAGACCAGCAACCGCAGATCATCTTCGTCGACATCATGATGCCGCGCCTGGACGGGTACCAGACCTGTGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCGACCCCGGTCATCATGCTCTCGTCCAAGGATGGCCTGTTCGACAAGGCGCGGGGACGCAT
CGTCGGCTCGGAGCAATACCTGACGAAGCCTTTCACGCGTGAAGAACTGCTGGGTGCCATCCGCACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677

Multiple sequence alignment