Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   XaFJ1_RS10890 Genome accession   NZ_CP046570
Coordinates   2611957..2612358 (-) Length   133 a.a.
NCBI ID   WP_045728072.1    Uniprot ID   -
Organism   Xanthomonas albilineans strain Xa-FJ1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2606957..2617358
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  XaFJ1_RS10875 (XaFJ1_GM002243) - 2608969..2611005 (-) 2037 WP_012916721.1 methyl-accepting chemotaxis protein -
  XaFJ1_RS10880 (XaFJ1_GM002244) - 2611046..2611576 (-) 531 WP_012916722.1 chemotaxis protein CheW -
  XaFJ1_RS10885 (XaFJ1_GM002245) - 2611578..2611940 (-) 363 WP_012916723.1 response regulator -
  XaFJ1_RS10890 (XaFJ1_GM002246) pilG 2611957..2612358 (-) 402 WP_045728072.1 twitching motility response regulator PilG Regulator
  XaFJ1_RS10895 (XaFJ1_GM002247) gshB 2612601..2613551 (+) 951 WP_012916725.1 glutathione synthase -
  XaFJ1_RS10900 (XaFJ1_GM002248) - 2613548..2614429 (+) 882 WP_012916726.1 energy transducer TonB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14658.03 Da        Isoelectric Point: 8.4856

>NTDB_id=405617 XaFJ1_RS10890 WP_045728072.1 2611957..2612358(-) (pilG) [Xanthomonas albilineans strain Xa-FJ1]
MSENTTAGRALAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNTLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=405617 XaFJ1_RS10890 WP_045728072.1 2611957..2612358(-) (pilG) [Xanthomonas albilineans strain Xa-FJ1]
ATGAGTGAAAACACGACTGCGGGGCGGGCGCTCGCAGGGCTTCGGGTCATGGTAATCGACGATTCGAAAACGATTCGTCG
TACCGCCGAGACATTGTTGAAGCGCGAAGGCTGCGAAGTCGTCACCGCGACGGACGGCTTCGAGGCGCTGGCCAAGATTG
CCGATCAGCAGCCGCAGATCATCTTCGTGGACATTATGATGCCACGCCTGGATGGGTATCAGACGTGTGCGCTTATCAAA
GGCAACACGTTGTTCAAGGCGACCCCGGTCATCATGTTGTCTTCCAAGGACGGTCTGTTCGACAAGGCGCGCGGTCGCAT
TGTCGGATCCGAGCAGTACCTCACCAAACCCTTTACACGTGAAGAACTGCTGGGCGCGATACGTACTTACGTCAACGCCT
AA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

72.581

93.233

0.677

Multiple sequence alignment