Detailed information NTG0405560

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: HX136_RS00805
• Genome accession: NZ_CP058571
• Coordinates: 171832..172815 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain EC2
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 166832..177815

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HX136_RS00790 (HX136_00790)	dppA	167975..169582 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
HX136_RS00795 (HX136_00795)	dppB	169890..170909 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
HX136_RS00800 (HX136_00800)	dppC	170919..171821 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
HX136_RS00805 (HX136_00805)	amiE	171832..172815 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
HX136_RS00810 (HX136_00810)	dppF	172812..173816 (+)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
HX136_RS00815 (HX136_00815)	yhjV	173846..175117 (-)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
HX136_RS00820 (HX136_00820)	ldrD	175593..175700 (+)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
HX136_RS00825 (HX136_00825)	bcsG	175787..177466 (-)	1680	WP_000191622.1	cellulose biosynthesis protein BcsG	-
HX136_RS00830 (HX136_00830)	bcsF	177463..177654 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=405560 HX136_RS00805 WP_001196486.1 171832..172815(+) (amiE) [Escherichia coli strain EC2]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=405560 HX136_RS00805 WP_001196486.1 171832..172815(+) (amiE) [Escherichia coli strain EC2]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404