Detailed information NTG0405527

Bioinformatically predicted

Overview

• Name: abrB
• Type: Regulator
• Locus tag: GNK04_RS00250
• Genome accession: NZ_CP046564
• Coordinates: 50708..50986 (-)
• Length: 92 a.a.
• NCBI ID: WP_098445902.1
• Uniprot ID: -
• Organism: Bacillus sp. N1-1
• Function: repression of comK; repression of rok (predicted from homology) Competence regulation

Genomic Context

Location: 45708..55986

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GNK04_RS00215 (GNK04_00215)	-	46185..46514 (+)	330	WP_098445895.1	cyclic-di-AMP receptor	-
GNK04_RS00220 (GNK04_00220)	holB	46537..47523 (+)	987	WP_159780764.1	DNA polymerase III subunit delta'	-
GNK04_RS00225 (GNK04_00225)	-	47528..48355 (+)	828	WP_098445897.1	stage 0 sporulation family protein	-
GNK04_RS00230 (GNK04_00230)	yabA	48372..48716 (+)	345	WP_098445898.1	DNA replication initiation control protein YabA	-
GNK04_RS00235 (GNK04_00235)	-	48804..49541 (+)	738	WP_159780765.1	tRNA1(Val) (adenine(37)-N6)-methyltransferase	-
GNK04_RS00240 (GNK04_00240)	-	49528..49830 (+)	303	WP_159780766.1	GIY-YIG nuclease family protein	-
GNK04_RS00245 (GNK04_00245)	rsmI	49790..50656 (+)	867	WP_159780767.1	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	-
GNK04_RS00250 (GNK04_00250)	abrB	50708..50986 (-)	279	WP_098445902.1	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	Regulator
GNK04_RS00255 (GNK04_00255)	metG	51439..53442 (+)	2004	WP_276609445.1	methionine--tRNA ligase	-
GNK04_RS00260 (GNK04_00260)	-	53722..54492 (+)	771	WP_159780769.1	TatD family hydrolase	-
GNK04_RS00265 (GNK04_00265)	-	54654..55952 (+)	1299	WP_159780770.1	G5 and 3D domain-containing protein	-

Sequence

Protein

• Length: 92 a.a.
• Molecular weight: 10222.93 Da
• Isoelectric Point: 5.2185

>NTDB_id=405527 GNK04_RS00250 WP_098445902.1 50708..50986(-) (abrB) [Bacillus sp. N1-1]
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDERIILKKYKPNMTCQVTGEVSDDNLAIGNGKLILSKEGAE
QVLEEIQKALAK

Nucleotide

• Length: 279 bp

>NTDB_id=405527 GNK04_RS00250 WP_098445902.1 50708..50986(-) (abrB) [Bacillus sp. N1-1]
ATGAAATCTACTGGTATTGTACGTAAAGTTGACGAGCTTGGCCGTGTTGTTATTCCGATCGAATTACGCCGTACACTTGG
TATTGCAGAAAAGGACGCTCTTGAAATCTATGTTGACGACGAGCGCATTATCCTAAAGAAGTATAAGCCTAACATGACTT
GCCAGGTAACTGGTGAAGTATCCGATGACAATCTTGCAATCGGTAATGGCAAGCTTATCCTTAGCAAAGAAGGCGCAGAG
CAAGTATTGGAAGAAATTCAAAAAGCTCTTGCAAAATAA

Domains

Predicted by InterproScan.

• AbrB C-terminal domain (AbrB_C) (53-88)

• Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin) (8-50)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
abrB	Bacillus subtilis subsp. subtilis str. 168	87.778	97.826	0.859