Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | GOQ08_RS01665 | Genome accession | NZ_CP046549 |
| Coordinates | 351343..351768 (+) | Length | 141 a.a. |
| NCBI ID | WP_000788342.1 | Uniprot ID | N9K1U0 |
| Organism | Acinetobacter baumannii strain 19WIARLN022_full | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 346343..356768
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GOQ08_RS01655 (GOQ08_01655) | pilY1 | 346999..350853 (+) | 3855 | WP_216074186.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| GOQ08_RS01660 (GOQ08_01660) | pilY2 | 350864..351346 (+) | 483 | WP_163063059.1 | type IV pilin protein | Machinery gene |
| GOQ08_RS01665 (GOQ08_01665) | pilE | 351343..351768 (+) | 426 | WP_000788342.1 | type IV pilin protein | Machinery gene |
| GOQ08_RS01670 (GOQ08_01670) | rpsP | 351915..352166 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| GOQ08_RS01675 (GOQ08_01675) | rimM | 352186..352734 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| GOQ08_RS01680 (GOQ08_01680) | trmD | 352780..353520 (+) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| GOQ08_RS01685 (GOQ08_01685) | rplS | 353729..354097 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| GOQ08_RS01690 (GOQ08_01690) | - | 354150..355091 (-) | 942 | WP_085916958.1 | triacylglycerol lipase | - |
| GOQ08_RS01695 (GOQ08_01695) | - | 355206..356240 (-) | 1035 | WP_001189447.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15214.45 Da Isoelectric Point: 7.8464
>NTDB_id=405348 GOQ08_RS01665 WP_000788342.1 351343..351768(+) (pilE) [Acinetobacter baumannii strain 19WIARLN022_full]
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=405348 GOQ08_RS01665 WP_000788342.1 351343..351768(+) (pilE) [Acinetobacter baumannii strain 19WIARLN022_full]
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
92.199 |
100 |
0.922 |
| comF | Acinetobacter baylyi ADP1 |
52.143 |
99.291 |
0.518 |