Detailed information NTG0405346

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: HXT67_RS23675
• Genome accession: NZ_CP058354
• Coordinates: 5192399..5193451 (-)
• Length: 350 a.a.
• NCBI ID: WP_014494880.1
• Uniprot ID: -
• Organism: Bradyrhizobium japonicum strain 5038
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 5187399..5198451

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HXT67_RS23650	-	5187464..5188210 (-)	747	WP_028170235.1	C13 family peptidase	-
HXT67_RS23655	-	5188586..5190328 (+)	1743	WP_028170234.1	adenylate/guanylate cyclase domain-containing protein	-
HXT67_RS23660	-	5190571..5190834 (+)	264	WP_259228998.1	methyltransferase	-
HXT67_RS23665	-	5191647..5191892 (+)	246	WP_225894894.1	DUF1214 domain-containing protein	-
HXT67_RS23670	-	5191973..5192191 (-)	219	WP_014494881.1	hypothetical protein	-
HXT67_RS23675	amiE	5192399..5193451 (-)	1053	WP_014494880.1	oligopeptide/dipeptide ABC transporter ATP-binding protein	Regulator
HXT67_RS23680	-	5193444..5194424 (-)	981	WP_014494879.1	ABC transporter ATP-binding protein	-
HXT67_RS23685	-	5194421..5195242 (-)	822	WP_014494878.1	ABC transporter permease	-
HXT67_RS23690	-	5195239..5196162 (-)	924	WP_014494877.1	ABC transporter permease	-
HXT67_RS23695	-	5196223..5197812 (-)	1590	WP_028170233.1	ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 350 a.a.
• Molecular weight: 38471.91 Da
• Isoelectric Point: 6.9600

>NTDB_id=405346 HXT67_RS23675 WP_014494880.1 5192399..5193451(-) (amiE) [Bradyrhizobium japonicum strain 5038]
MHEPQDMRGEARSDDDLILSIEDLAVHFPMGGGLLGRSRRVLRAVDGVDLSLRRGECLGLVGESGSGKSTVALSILGLLT
PTRGRIVLDGQVVTNRQSGDRKSLARTVQIVFQDPYASLNPRQTVRRTLEDPLRVHGVTAKSEIEDRVATMLRHVGLRPE
QADRYPHEFSGGQRQRIGIARALILNPRIVICDEPVSALDVSIRAQIINLLLELKDTLGLSYIMISHDLGVVEHMSDRVA
VMYLGRIVENGHWREIFERPAHPYTQALIAAIPDPLRHAPLATTGGDLPNPLNPPNGCAFSPRCRYAEAVCRHEPGPVLE
TRADGHEVRCWRADEIAGQTQLASTEGGHP

Nucleotide

• Length: 1053 bp

>NTDB_id=405346 HXT67_RS23675 WP_014494880.1 5192399..5193451(-) (amiE) [Bradyrhizobium japonicum strain 5038]
ATGCATGAGCCGCAAGACATGCGGGGTGAAGCGAGGTCGGACGACGATCTCATTCTCAGCATCGAGGATCTCGCGGTTCA
TTTTCCGATGGGGGGCGGCCTGCTGGGCCGCAGCCGGCGGGTGCTCCGTGCCGTCGACGGTGTCGATCTCAGCCTGAGAC
GAGGCGAATGCCTCGGCCTCGTCGGCGAGTCCGGCTCAGGCAAGTCGACCGTCGCGTTGTCGATCCTGGGGCTCCTGACG
CCGACGCGCGGCCGCATCGTGCTGGACGGGCAGGTGGTGACGAACAGGCAGTCCGGCGACCGAAAGTCGCTGGCCCGCAC
CGTGCAGATCGTCTTTCAGGATCCTTACGCCTCGCTCAACCCACGCCAGACCGTCCGCCGCACGCTGGAAGATCCCCTGC
GTGTGCATGGCGTGACCGCGAAAAGCGAGATCGAGGACCGTGTTGCGACGATGCTGCGGCATGTCGGCCTGCGGCCGGAA
CAGGCCGACCGCTATCCGCACGAATTCTCCGGCGGCCAGCGCCAGCGCATCGGGATTGCGCGCGCCCTGATCCTCAATCC
CAGGATCGTCATCTGCGACGAGCCGGTATCGGCGCTCGACGTCTCGATCCGCGCCCAGATCATCAATTTGCTGCTGGAAT
TGAAGGACACGCTCGGTCTCTCCTACATCATGATCAGCCACGACCTCGGCGTCGTCGAGCACATGAGCGACCGCGTCGCC
GTCATGTATCTCGGCCGCATTGTCGAGAACGGCCACTGGCGCGAAATCTTCGAACGGCCGGCGCACCCCTATACGCAAGC
CCTGATCGCGGCCATCCCCGATCCGCTGCGTCATGCGCCGTTGGCGACGACAGGCGGCGACCTTCCCAACCCGCTCAATC
CGCCGAACGGATGCGCCTTCAGCCCGCGTTGCCGGTACGCGGAGGCCGTGTGTCGTCACGAGCCCGGTCCGGTGCTGGAA
ACGCGCGCCGATGGACATGAGGTGAGGTGCTGGCGGGCGGACGAGATTGCGGGGCAGACGCAATTGGCTTCGACCGAGGG
CGGGCATCCCTAG

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (248-311)

• ABC transporter (ABC_tran) (46-196)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus thermophilus LMG 18311	39.329	93.714	0.369
amiE	Streptococcus thermophilus LMD-9	39.329	93.714	0.369
amiE	Streptococcus salivarius strain HSISS4	37.685	96.286	0.363