Detailed information NTG0405312

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: GOQ06_RS08985
• Genome accession: NZ_CP046546
• Coordinates: 1857070..1857771 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain 19WIARLN023_full
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1852070..1862771

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GOQ06_RS08950 (GOQ06_08855)	kdsB	1852593..1853354 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
GOQ06_RS08955 (GOQ06_08860)	-	1853366..1854346 (+)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
GOQ06_RS08960 (GOQ06_08865)	-	1854358..1854699 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
GOQ06_RS08965 (GOQ06_08870)	-	1854717..1855490 (+)	774	WP_000497298.1	TatD family hydrolase	-
GOQ06_RS08970 (GOQ06_08875)	-	1855528..1856136 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
GOQ06_RS08975 (GOQ06_08880)	-	1856146..1856700 (+)	555	WP_000841374.1	type II secretion system protein	-
GOQ06_RS08980 (GOQ06_08885)	xcpV	1856690..1857070 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
GOQ06_RS08985 (GOQ06_08890)	xcpW	1857070..1857771 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
GOQ06_RS08990 (GOQ06_08895)	gspK	1857771..1858730 (+)	960	WP_000301468.1	type II secretion system minor pseudopilin GspK	-
GOQ06_RS08995 (GOQ06_08900)	-	1858960..1859556 (+)	597	WP_000908453.1	6-carboxytetrahydropterin synthase	-
GOQ06_RS09000 (GOQ06_08905)	ung	1859607..1860320 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
GOQ06_RS09005 (GOQ06_08910)	-	1860317..1861441 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
GOQ06_RS09010 (GOQ06_08915)	tadA	1861448..1861951 (+)	504	WP_031954106.1	tRNA adenosine(34) deaminase TadA	-
GOQ06_RS09015 (GOQ06_08920)	-	1862021..1862464 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=405312 GOQ06_RS08985 WP_000594589.1 1857070..1857771(+) (xcpW) [Acinetobacter baumannii strain 19WIARLN023_full]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=405312 GOQ06_RS08985 WP_000594589.1 1857070..1857771(+) (xcpW) [Acinetobacter baumannii strain 19WIARLN023_full]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATTGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGACACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAATGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996