Detailed information NTG0405239

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: GOD87_RS08055
• Genome accession: NZ_CP046536
• Coordinates: 1687828..1688529 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594582.1
• Uniprot ID: A0AAX0TJI0
• Organism: Acinetobacter baumannii strain XL380
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1682828..1693529

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GOD87_RS08020 (GOD87_08020)	kdsB	1683351..1684112 (+)	762	WP_000680696.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
GOD87_RS08025 (GOD87_08025)	-	1684124..1685104 (+)	981	WP_057092777.1	DNA polymerase III subunit delta'	-
GOD87_RS08030 (GOD87_08030)	-	1685116..1685457 (+)	342	WP_001183025.1	PilZ domain-containing protein	-
GOD87_RS08035 (GOD87_08035)	-	1685475..1686248 (+)	774	WP_000497298.1	TatD family hydrolase	-
GOD87_RS08040 (GOD87_08040)	-	1686286..1686894 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
GOD87_RS08045 (GOD87_08045)	-	1686904..1687458 (+)	555	WP_000841373.1	type II secretion system protein	-
GOD87_RS08050 (GOD87_08050)	xcpV	1687448..1687828 (+)	381	WP_000836912.1	type II secretion system minor pseudopilin GspI	Machinery gene
GOD87_RS08055 (GOD87_08055)	xcpW	1687828..1688529 (+)	702	WP_000594582.1	type II secretion system minor pseudopilin GspJ	Machinery gene
GOD87_RS08060 (GOD87_08060)	gspK	1688529..1689488 (+)	960	WP_057092779.1	type II secretion system minor pseudopilin GspK	-
GOD87_RS08065 (GOD87_08065)	-	1689718..1690314 (+)	597	WP_000908453.1	6-pyruvoyl trahydropterin synthase family protein	-
GOD87_RS08070 (GOD87_08070)	ung	1690365..1691078 (+)	714	WP_001177530.1	uracil-DNA glycosylase	-
GOD87_RS08075 (GOD87_08075)	-	1691075..1692199 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
GOD87_RS08080 (GOD87_08080)	tadA	1692206..1692709 (+)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
GOD87_RS08085 (GOD87_08085)	-	1692779..1693222 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26577.60 Da
• Isoelectric Point: 9.5501

>NTDB_id=405239 GOD87_RS08055 WP_000594582.1 1687828..1688529(+) (xcpW) [Acinetobacter baumannii strain XL380]
MIKNKYIHIRSIASRLAARSSSARLARASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQIHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVIKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=405239 GOD87_RS08055 WP_000594582.1 1687828..1688529(+) (xcpW) [Acinetobacter baumannii strain XL380]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGCTTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAGCTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGGCAAATTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCATAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	98.712	100	0.987