Detailed information
Bioinformatically predicted
Overview
| Name | comL/pilP | Type | Machinery gene |
| Locus tag | B18_RS10650 | Genome accession | NZ_CP058332 |
| Coordinates | 2301440..2301964 (+) | Length | 174 a.a. |
| NCBI ID | WP_003116136.1 | Uniprot ID | A0A0H2ZIN8 |
| Organism | Pseudomonas aeruginosa strain B18 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2296440..2306964
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B18_RS10630 (B18_10615) | - | 2296507..2298978 (-) | 2472 | WP_179118826.1 | penicillin-binding protein 1A | - |
| B18_RS10635 (B18_10620) | pilM | 2299163..2300227 (+) | 1065 | WP_003110888.1 | type IV pilus assembly protein PilM | Machinery gene |
| B18_RS10640 (B18_10625) | pilN | 2300227..2300823 (+) | 597 | WP_003141783.1 | type 4a pilus biogenesis protein PilN | - |
| B18_RS10645 (B18_10630) | pilO | 2300820..2301443 (+) | 624 | WP_023110484.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| B18_RS10650 (B18_10635) | comL/pilP | 2301440..2301964 (+) | 525 | WP_003116136.1 | type 4a pilus biogenesis lipoprotein PilP | Machinery gene |
| B18_RS10655 (B18_10640) | pilQ | 2302018..2304150 (+) | 2133 | WP_023110483.1 | type 4a pilus secretin PilQ | Machinery gene |
| B18_RS10660 (B18_10645) | aroK | 2304162..2304680 (+) | 519 | WP_003095833.1 | shikimate kinase AroK | - |
| B18_RS10665 (B18_10650) | aroB | 2304730..2305836 (+) | 1107 | WP_003116138.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 174 a.a. Molecular weight: 19224.07 Da Isoelectric Point: 9.7252
>NTDB_id=405028 B18_RS10650 WP_003116136.1 2301440..2301964(+) (comL/pilP) [Pseudomonas aeruginosa strain B18]
MRARLILSSLLLTMLAGCGANSEFGDLQAYMNEVRARPKGNIEPLPKFQPYEAFTYSASNLRSPFQPPVKIDLTVRQKGN
KVVKPDETRVKQFLEGFNIETFEMVGTLSNAQGTFALVKGAGGVHRVRVGDYLGRNDGKVVGISEGKIDVIEIVPDGEGN
WLERPRSLTLKERS
MRARLILSSLLLTMLAGCGANSEFGDLQAYMNEVRARPKGNIEPLPKFQPYEAFTYSASNLRSPFQPPVKIDLTVRQKGN
KVVKPDETRVKQFLEGFNIETFEMVGTLSNAQGTFALVKGAGGVHRVRVGDYLGRNDGKVVGISEGKIDVIEIVPDGEGN
WLERPRSLTLKERS
Nucleotide
Download Length: 525 bp
>NTDB_id=405028 B18_RS10650 WP_003116136.1 2301440..2301964(+) (comL/pilP) [Pseudomonas aeruginosa strain B18]
ATGAGAGCCCGCCTGATTCTGAGCAGCTTGCTGCTCACCATGCTTGCCGGTTGCGGCGCGAATTCCGAGTTCGGCGATCT
TCAAGCCTATATGAACGAGGTACGTGCTCGACCTAAGGGCAATATCGAGCCTCTGCCGAAGTTTCAGCCATATGAAGCTT
TTACTTATAGCGCTTCGAACCTGCGTAGTCCGTTCCAGCCGCCGGTGAAGATCGACCTGACCGTGCGGCAGAAAGGCAAT
AAGGTGGTTAAACCCGACGAGACACGGGTCAAGCAGTTCCTGGAAGGTTTCAACATCGAAACCTTCGAGATGGTCGGCAC
ACTGTCCAACGCCCAGGGTACCTTCGCCTTGGTGAAGGGCGCGGGTGGCGTGCATCGGGTGAGGGTCGGGGACTACCTGG
GGCGCAACGATGGCAAGGTCGTCGGCATCAGCGAAGGAAAAATAGACGTGATTGAAATCGTTCCTGACGGAGAGGGGAAC
TGGCTGGAGCGTCCGCGCAGCCTGACTCTCAAGGAACGCTCCTGA
ATGAGAGCCCGCCTGATTCTGAGCAGCTTGCTGCTCACCATGCTTGCCGGTTGCGGCGCGAATTCCGAGTTCGGCGATCT
TCAAGCCTATATGAACGAGGTACGTGCTCGACCTAAGGGCAATATCGAGCCTCTGCCGAAGTTTCAGCCATATGAAGCTT
TTACTTATAGCGCTTCGAACCTGCGTAGTCCGTTCCAGCCGCCGGTGAAGATCGACCTGACCGTGCGGCAGAAAGGCAAT
AAGGTGGTTAAACCCGACGAGACACGGGTCAAGCAGTTCCTGGAAGGTTTCAACATCGAAACCTTCGAGATGGTCGGCAC
ACTGTCCAACGCCCAGGGTACCTTCGCCTTGGTGAAGGGCGCGGGTGGCGTGCATCGGGTGAGGGTCGGGGACTACCTGG
GGCGCAACGATGGCAAGGTCGTCGGCATCAGCGAAGGAAAAATAGACGTGATTGAAATCGTTCCTGACGGAGAGGGGAAC
TGGCTGGAGCGTCCGCGCAGCCTGACTCTCAAGGAACGCTCCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comL/pilP | Acinetobacter baylyi ADP1 |
36.628 |
98.851 |
0.362 |