Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   SSGZ1_RS05180 Genome accession   NC_017617
Coordinates   1041204..1041686 (+) Length   160 a.a.
NCBI ID   WP_024381385.1    Uniprot ID   -
Organism   Streptococcus suis GZ1     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1036204..1046686
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SSGZ1_RS05155 (SSGZ1_1002) - 1037453..1038763 (-) 1311 WP_014636009.1 GntP family permease -
  SSGZ1_RS05160 (SSGZ1_1003) folK 1038814..1039302 (-) 489 WP_014636010.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  SSGZ1_RS05165 (SSGZ1_1004) folB 1039299..1039661 (-) 363 WP_012027113.1 dihydroneopterin aldolase -
  SSGZ1_RS05170 (SSGZ1_1005) folP 1039654..1040466 (-) 813 WP_014636011.1 dihydropteroate synthase -
  SSGZ1_RS05175 (SSGZ1_1006) folE 1040475..1041037 (-) 563 Protein_973 GTP cyclohydrolase I FolE -
  SSGZ1_RS05180 (SSGZ1_1007) mutX 1041204..1041686 (+) 483 WP_024381385.1 NUDIX hydrolase Machinery gene
  SSGZ1_RS05185 (SSGZ1_1008) - 1041735..1042412 (-) 678 WP_014636014.1 DUF4956 domain-containing protein -
  SSGZ1_RS05190 (SSGZ1_1009) - 1042399..1043142 (-) 744 WP_012027116.1 polyphosphate polymerase domain-containing protein -
  SSGZ1_RS05195 (SSGZ1_1010) - 1043335..1043637 (+) 303 WP_002938072.1 hypothetical protein -
  SSGZ1_RS05200 (SSGZ1_1011) - 1043658..1043924 (-) 267 WP_012775169.1 DUF2087 domain-containing protein -
  SSGZ1_RS05205 (SSGZ1_1012) pheT 1043979..1046378 (-) 2400 WP_012027118.1 phenylalanine--tRNA ligase subunit beta -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18540.89 Da        Isoelectric Point: 4.4960

>NTDB_id=40500 SSGZ1_RS05180 WP_024381385.1 1041204..1041686(+) (mutX) [Streptococcus suis GZ1]
MTKKPVQLATICYIDNGKEFLLLHRNKKENDVHQGKWIGVGGKLEPGETPQACAIREVFEETGLTVTKHALKGVITFPDF
TPNTDWYTYVFKITGFEGSLIDCNEGDLEWVPYDQVLSKPTWEGDRHFQEWLLEDKPFFSACFRYDGDKLLDYSVDFYEE

Nucleotide


Download         Length: 483 bp        

>NTDB_id=40500 SSGZ1_RS05180 WP_024381385.1 1041204..1041686(+) (mutX) [Streptococcus suis GZ1]
ATGACCAAGAAACCCGTCCAACTCGCTACGATTTGCTACATTGATAATGGTAAGGAATTTCTTCTCCTTCATCGAAACAA
GAAAGAAAATGACGTCCATCAAGGGAAATGGATTGGAGTTGGTGGCAAACTGGAACCTGGTGAAACACCGCAAGCCTGTG
CCATTCGAGAAGTCTTTGAGGAAACTGGGCTTACTGTAACGAAGCATGCTCTAAAAGGAGTGATAACCTTCCCAGACTTT
ACTCCAAACACTGACTGGTACACCTATGTCTTTAAGATAACTGGTTTTGAAGGAAGTCTTATTGACTGCAATGAAGGTGA
CTTAGAGTGGGTTCCCTATGACCAAGTCTTGTCCAAACCAACTTGGGAGGGCGACCGGCATTTTCAAGAATGGCTATTAG
AGGACAAACCATTTTTTTCCGCTTGCTTCCGCTATGATGGGGACAAATTGCTGGATTACAGTGTTGATTTTTATGAAGAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(8-132)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

81.046

95.625

0.775

Multiple sequence alignment