Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   GE024_RS08590 Genome accession   NZ_CP046521
Coordinates   1719525..1720250 (-) Length   241 a.a.
NCBI ID   WP_003044963.1    Uniprot ID   A0A2D4DM13
Organism   Streptococcus canis strain HL_100     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1714525..1725250
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GE024_RS08555 (GE024_08595) - 1714568..1714864 (-) 297 WP_003044945.1 YlxR family protein -
  GE024_RS08560 (GE024_08600) nusA 1714880..1716037 (-) 1158 WP_093999291.1 transcription termination factor NusA -
  GE024_RS08565 (GE024_08605) rimP 1716207..1716725 (-) 519 WP_171004479.1 ribosome maturation factor RimP -
  GE024_RS08575 (GE024_08615) trmB 1717007..1717642 (-) 636 WP_093999293.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  GE024_RS08580 (GE024_08620) ccrZ 1717642..1718433 (-) 792 WP_003044956.1 cell cycle regulator CcrZ -
  GE024_RS08585 (GE024_08625) - 1718488..1719522 (-) 1035 WP_093999294.1 ABC transporter permease -
  GE024_RS08590 (GE024_08630) pptA 1719525..1720250 (-) 726 WP_003044963.1 ABC transporter ATP-binding protein Regulator
  GE024_RS08595 (GE024_08635) - 1720322..1720741 (+) 420 WP_093999295.1 HIT family protein -
  GE024_RS08600 (GE024_08640) - 1720738..1721055 (+) 318 WP_093999296.1 chemotaxis protein -
  GE024_RS08605 (GE024_08645) - 1721104..1722375 (-) 1272 WP_093999297.1 LCP family protein -
  GE024_RS08610 (GE024_08650) - 1722384..1722908 (-) 525 WP_003044971.1 GNAT family N-acetyltransferase -
  GE024_RS08615 (GE024_08655) tsaE 1722901..1723344 (-) 444 WP_039994873.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  GE024_RS08620 (GE024_08660) - 1723532..1724992 (-) 1461 WP_093999298.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26543.88 Da        Isoelectric Point: 4.8524

>NTDB_id=404870 GE024_RS08590 WP_003044963.1 1719525..1720250(-) (pptA) [Streptococcus canis strain HL_100]
MLNIENLTGGYLNIPVLKEVSFSVGNGELVGLIGLNGAGKSTTINEIIGFLKPYKGEISIDGLTLAENPADYRKKIGFIP
ETPSLYEELTLAEHINTVAMAYDIDVELAQKRAKPFLDMFRLTDKLDWFPVHFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIKTLEIEKAKGKSILMSTHVLDSAEKMCDRFVILHHGQVRAQGTLAELQATFGDPSASLNDIYLALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=404870 GE024_RS08590 WP_003044963.1 1719525..1720250(-) (pptA) [Streptococcus canis strain HL_100]
ATGTTAAACATTGAAAATCTAACGGGAGGCTACCTTAATATTCCCGTTTTAAAAGAGGTTTCATTTTCTGTTGGCAATGG
AGAATTGGTCGGTTTAATCGGGTTAAATGGAGCTGGAAAGTCAACGACCATCAATGAAATTATTGGTTTTTTAAAACCCT
ACAAGGGAGAAATCTCCATTGACGGCCTTACGCTGGCTGAAAATCCAGCAGACTACCGTAAAAAAATTGGTTTTATCCCA
GAAACTCCTAGTCTTTACGAAGAATTAACCTTAGCAGAGCATATTAATACTGTGGCTATGGCCTACGATATTGATGTGGA
GTTGGCCCAGAAACGGGCAAAGCCTTTTTTAGACATGTTTCGCTTGACAGATAAACTCGACTGGTTTCCTGTGCATTTTT
CAAAGGGCATGAAGCAAAAAGTCATGATTATTTGTGCTTTTGTGATTGATCCCAGCTTGTTTATCCTTGATGAGCCTTTT
TTAGGGTTAGATCCACTAGCTATTTCGGACTTGATTAAGACTTTAGAGATTGAAAAAGCCAAAGGCAAATCGATTTTAAT
GAGTACTCACGTGCTAGACTCTGCTGAAAAAATGTGTGATCGTTTTGTGATTTTGCACCATGGTCAGGTGCGTGCTCAAG
GAACTCTTGCTGAGTTACAAGCGACCTTTGGAGATCCTTCGGCTAGCTTAAACGATATTTATTTGGCATTGACAAAAGAG
GGCTAG

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2D4DM13

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

75.732

99.17

0.751
  pptA Streptococcus thermophilus LMD-9

74.895

99.17

0.743

Multiple sequence alignment