Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   GE024_RS02815 Genome accession   NZ_CP046521
Coordinates   530607..531416 (+) Length   269 a.a.
NCBI ID   WP_003047202.1    Uniprot ID   A0A2D4DNS0
Organism   Streptococcus canis strain HL_100     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 525607..536416
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GE024_RS02795 (GE024_02805) - 525789..526499 (+) 711 WP_093998385.1 MIP/aquaporin family protein -
  GE024_RS02800 (GE024_02810) - 527373..528368 (+) 996 WP_138114078.1 DUF3114 domain-containing protein -
  GE024_RS02805 (GE024_02815) vicR 528548..529258 (+) 711 WP_003049952.1 response regulator YycF Regulator
  GE024_RS02810 (GE024_02820) vicK 529251..530603 (+) 1353 WP_093998382.1 cell wall metabolism sensor histidine kinase VicK Regulator
  GE024_RS02815 (GE024_02825) vicX 530607..531416 (+) 810 WP_003047202.1 MBL fold metallo-hydrolase Regulator
  GE024_RS02820 (GE024_02830) rnc 531518..532210 (+) 693 WP_093998381.1 ribonuclease III -
  GE024_RS02825 (GE024_02835) smc 532211..535756 (+) 3546 WP_156667675.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30125.32 Da        Isoelectric Point: 6.0739

>NTDB_id=404852 GE024_RS02815 WP_003047202.1 530607..531416(+) (vicX) [Streptococcus canis strain HL_100]
MIESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
VYANEKTWQLMDERNMLGKLDASQKHIFQRDKMLTFGDVDIESFGVSHDAVDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGHKTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLGVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=404852 GE024_RS02815 WP_003047202.1 530607..531416(+) (vicX) [Streptococcus canis strain HL_100]
ATGATTGAAAGCGGTTTTAAATATAGTATTTTGGCATCTGGCTCCACAGGCAATTGTTTTTATTTAGAAACACCTAAAAA
GCGCTTATTAATTGACGCGGGGTTGACTGGTAAGAAAATCACCAGTCTCCTTGCTGAAATTGACCGCAAGCCTGAAGATT
TAGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGAGTGGGGGTCATGGCTCGTAAATACCATTTGGAC
GTCTATGCCAATGAAAAAACGTGGCAGTTGATGGATGAGCGCAATATGCTAGGAAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGAGATAAGATGTTGACCTTTGGAGATGTTGACATTGAAAGTTTTGGGGTTAGCCATGATGCTGTTGATCCCC
AGTTTTACCGTATCATGAAAGACAACAAATCGTTTGTAATGCTGACTGATACAGGTTATGTTAGCGATCGAATGACAGGT
ATTATTGAAAATGCAGATGGTTACTTGATTGAGTCCAATCATGACATTGAAATTTTAAGATCAGGCTCTTACCCTTGGAG
TTTAAAACAACGCATTTTGTCAGATCTGGGTCATTTGTCAAATGAAGATGGTGCTGGGGCCATGATTAGAAGTTTGGGGC
ATAAGACGAAAAAAATCTATTTGGGCCATTTGAGTAAAGAAAATAACATCAAAGAGCTGGCTCACATGACCATGGTTAAC
CAATTAGCCATGGCAGACTTGGGAGTTGGAACAGATTTTACGGTTCATGACACTTCCCCAGATACGGCCTGTCCCTTGAC
GGATATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-216)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2D4DNS0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.208

100

0.762

Multiple sequence alignment