Detailed information NTG0404845

Bioinformatically predicted

Overview

• Name: comX/sigX/comX2/sigX2
• Type: Regulator
• Locus tag: GE024_RS01930
• Genome accession: NZ_CP046521
• Coordinates: 363299..363787 (+)
• Length: 162 a.a.
• NCBI ID: WP_039994770.1
• Uniprot ID: -
• Organism: Streptococcus canis strain HL_100
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IScluster/Tn	363976..365081	363299..363787	flank	189

Gene organization within MGE regions

Location: 363299..365081

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GE024_RS01930 (GE024_01925)	comX/sigX/comX2/sigX2	363299..363787 (+)	489	WP_039994770.1	hypothetical protein	Regulator

Sequence

Protein

• Length: 162 a.a.
• Molecular weight: 19678.57 Da
• Isoelectric Point: 5.7359

>NTDB_id=404845 GE024_RS01930 WP_039994770.1 363299..363787(+) (comX/sigX/comX2/sigX2) [Streptococcus canis strain HL_100]
MDMSIETEVVFEKVKPIILKLKRHYYIQLWEREDWLQEGYLILVSLLEQHPELLWEDERLYRYFKTKFSSYLKDVLRQQE
SQKRQFHKMAYEEIGDVAHAIPSGGLWLDDYVAYREVVEVLEGQLGEEERLQFQALVRGERFKGRQALLRKLRPYFEGFE
RS

Nucleotide

• Length: 489 bp

>NTDB_id=404845 GE024_RS01930 WP_039994770.1 363299..363787(+) (comX/sigX/comX2/sigX2) [Streptococcus canis strain HL_100]
ATGGACATGTCGATAGAGACAGAAGTAGTGTTTGAGAAGGTGAAACCCATTATCTTGAAGTTGAAGCGTCATTATTATAT
TCAATTGTGGGAGAGAGAGGATTGGTTACAGGAAGGGTATTTGATATTGGTGAGTCTTCTAGAGCAGCATCCTGAATTAC
TTTGGGAAGACGAACGGTTGTATCGTTATTTTAAGACTAAGTTTTCATCGTATTTGAAGGATGTCTTGCGTCAGCAAGAA
AGTCAGAAGCGTCAGTTTCATAAAATGGCTTATGAGGAGATAGGTGATGTAGCACATGCGATTCCATCAGGTGGGTTATG
GTTGGATGATTACGTGGCCTACAGGGAGGTGGTTGAGGTGTTAGAAGGGCAGTTGGGTGAAGAGGAGCGGTTACAGTTTC
AGGCCTTGGTGAGAGGGGAACGGTTTAAGGGAAGGCAGGCCTTGCTTAGGAAGTTGCGTCCTTATTTTGAGGGATTTGAG
AGAAGTTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	77.987	98.148	0.765
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	77.987	98.148	0.765
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	77.358	98.148	0.759
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	77.358	98.148	0.759
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	76.73	98.148	0.753
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	76.73	98.148	0.753
comX/sigX	Streptococcus mutans UA159	51.899	97.531	0.506
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	48.077	96.296	0.463
comX	Streptococcus sobrinus strain NIDR 6715-7	42.857	99.383	0.426
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	41.667	96.296	0.401
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	41.667	96.296	0.401
comX	Streptococcus thermophilus LMD-9	43.046	93.21	0.401
comX	Streptococcus thermophilus LMG 18311	43.046	93.21	0.401
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	41.722	93.21	0.389
comX/sigX	Streptococcus salivarius strain HSISS4	41.06	93.21	0.383
comX	Streptococcus salivarius SK126	41.06	93.21	0.383
comX/comX2	Streptococcus pneumoniae TIGR4	41.333	92.593	0.383
comX/comX1	Streptococcus pneumoniae TIGR4	41.333	92.593	0.383
comX/comX2	Streptococcus pneumoniae Rx1	41.333	92.593	0.383
comX/comX1	Streptococcus pneumoniae Rx1	41.333	92.593	0.383
comX/comX2	Streptococcus pneumoniae D39	41.333	92.593	0.383
comX/comX1	Streptococcus pneumoniae D39	41.333	92.593	0.383
comX/comX2	Streptococcus pneumoniae R6	41.333	92.593	0.383
comX/comX1	Streptococcus pneumoniae R6	41.333	92.593	0.383
comX/sigX	Streptococcus suis D9	39.355	95.679	0.377
comX/sigX	Streptococcus suis isolate S10	39.355	95.679	0.377
comX/sigX	Streptococcus suis P1/7	39.355	95.679	0.377
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	40.397	93.21	0.377
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	40.397	93.21	0.377