Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | HX738_RS03060 | Genome accession | NZ_CP058299 |
| Coordinates | 591015..591398 (+) | Length | 127 a.a. |
| NCBI ID | WP_002852281.1 | Uniprot ID | Q9PHN2 |
| Organism | Campylobacter jejuni strain A9a | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 586015..596398
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HX738_RS03040 (HX738_03040) | - | 586094..588028 (-) | 1935 | WP_052801823.1 | ribonuclease R family protein | - |
| HX738_RS03045 (HX738_03045) | ilvC | 588147..589169 (+) | 1023 | WP_002855220.1 | ketol-acid reductoisomerase | - |
| HX738_RS03050 (HX738_03050) | - | 589173..590255 (+) | 1083 | WP_002882551.1 | divergent polysaccharide deacetylase family protein | - |
| HX738_RS03055 (HX738_03055) | dprA | 590245..591018 (+) | 774 | WP_002874287.1 | DNA-processing protein DprA | Machinery gene |
| HX738_RS03060 (HX738_03060) | dprB | 591015..591398 (+) | 384 | WP_002852281.1 | Holliday junction resolvase RuvX | Machinery gene |
| HX738_RS03065 (HX738_03065) | - | 591427..592266 (+) | 840 | WP_011049748.1 | RsmB/NOP family class I SAM-dependent RNA methyltransferase | - |
| HX738_RS03070 (HX738_03070) | msrA | 592442..592939 (-) | 498 | WP_002852283.1 | peptide-methionine (S)-S-oxide reductase MsrA | - |
| HX738_RS03075 (HX738_03075) | ppa | 592981..593499 (-) | 519 | WP_002867724.1 | inorganic diphosphatase | - |
| HX738_RS03080 (HX738_03080) | adk | 593509..594087 (-) | 579 | WP_002859580.1 | adenylate kinase | - |
| HX738_RS03085 (HX738_03085) | aspS | 594084..595835 (-) | 1752 | WP_177640513.1 | aspartate--tRNA ligase | - |
Sequence
Protein
Download Length: 127 a.a. Molecular weight: 14088.59 Da Isoelectric Point: 9.5433
>NTDB_id=404544 HX738_RS03060 WP_002852281.1 591015..591398(+) (dprB) [Campylobacter jejuni strain A9a]
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
Nucleotide
Download Length: 384 bp
>NTDB_id=404544 HX738_RS03060 WP_002852281.1 591015..591398(+) (dprB) [Campylobacter jejuni strain A9a]
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAGATTTCTTTAC
TCATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCCTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAGATTTCTTTAC
TCATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCCTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
44.882 |
100 |
0.449 |