Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | GFX43_RS19580 | Genome accession | NZ_CP046448 |
| Coordinates | 3827339..3827788 (+) | Length | 149 a.a. |
| NCBI ID | WP_014475770.1 | Uniprot ID | A0A0D1KPR3 |
| Organism | Bacillus subtilis strain ZD01 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 3822339..3832788
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GFX43_RS19560 (GFX43_019560) | hxlR | 3823552..3823914 (-) | 363 | WP_015482783.1 | transcriptional activator HxlR | - |
| GFX43_RS19565 (GFX43_019565) | hxlA | 3824146..3824778 (+) | 633 | WP_015482782.1 | 3-hexulose-6-phosphate synthase | - |
| GFX43_RS19570 (GFX43_019570) | hxlB | 3824784..3825341 (+) | 558 | WP_015482781.1 | 6-phospho-3-hexuloisomerase | - |
| GFX43_RS19575 (GFX43_019575) | tlpC | 3825452..3827173 (+) | 1722 | WP_041517645.1 | methyl-accepting chemotaxis protein TlpC | - |
| GFX43_RS19580 (GFX43_019580) | nucA/comI | 3827339..3827788 (+) | 450 | WP_014475770.1 | DNA-entry nuclease | Machinery gene |
| GFX43_RS19585 (GFX43_019585) | nin/comJ | 3827815..3828213 (+) | 399 | WP_015382736.1 | DNA-entry nuclease inhibitor | Regulator |
| GFX43_RS19590 (GFX43_019590) | bglC | 3828250..3829683 (-) | 1434 | WP_015382735.1 | 6-phospho-beta-glucosidase | - |
| GFX43_RS19595 (GFX43_019595) | yckD | 3829836..3830168 (-) | 333 | WP_015252849.1 | YckD family protein | - |
| GFX43_RS19600 (GFX43_019600) | yckC | 3830250..3830681 (-) | 432 | WP_046340202.1 | RDD family protein | - |
| GFX43_RS19605 (GFX43_019605) | - | 3830731..3830928 (-) | 198 | WP_144052033.1 | hypothetical protein | - |
| GFX43_RS19610 (GFX43_019610) | yckB | 3831090..3831953 (+) | 864 | WP_015482776.1 | transporter substrate-binding domain-containing protein | - |
| GFX43_RS19615 (GFX43_019615) | yckA | 3831963..3832643 (+) | 681 | WP_015382730.1 | amino acid ABC transporter permease | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 16440.39 Da Isoelectric Point: 4.5282
>NTDB_id=404433 GFX43_RS19580 WP_014475770.1 3827339..3827788(+) (nucA/comI) [Bacillus subtilis strain ZD01]
MNITTDIIKTILLVIVIIAAAAVGLIKGDFFSADQKTSQTKEYDETIAFPSDRYPETAKHIKDAINEGHSEVCTIDRDGA
EERREQSLKDVPSKKGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHQLTDYPDGTKVLFTIQ
MNITTDIIKTILLVIVIIAAAAVGLIKGDFFSADQKTSQTKEYDETIAFPSDRYPETAKHIKDAINEGHSEVCTIDRDGA
EERREQSLKDVPSKKGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHQLTDYPDGTKVLFTIQ
Nucleotide
Download Length: 450 bp
>NTDB_id=404433 GFX43_RS19580 WP_014475770.1 3827339..3827788(+) (nucA/comI) [Bacillus subtilis strain ZD01]
GTGAACATCACGACGGACATCATAAAAACGATACTTCTCGTCATCGTCATCATAGCAGCTGCAGCTGTCGGTCTGATAAA
AGGAGACTTTTTCTCAGCTGATCAAAAAACGTCTCAAACGAAAGAATATGATGAAACAATCGCCTTCCCATCTGACCGGT
ATCCCGAAACTGCCAAGCATATTAAGGATGCGATAAATGAGGGGCACTCAGAGGTGTGCACTATCGACAGAGACGGAGCT
GAGGAACGCCGCGAGCAATCATTAAAGGACGTACCTTCCAAAAAGGGATATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCCGCTGACAACCGCGGAGCAGGCTCTTGGGTCGGGCATC
AGCTTACCGATTACCCAGACGGCACAAAGGTTTTATTCACAATTCAGTAA
GTGAACATCACGACGGACATCATAAAAACGATACTTCTCGTCATCGTCATCATAGCAGCTGCAGCTGTCGGTCTGATAAA
AGGAGACTTTTTCTCAGCTGATCAAAAAACGTCTCAAACGAAAGAATATGATGAAACAATCGCCTTCCCATCTGACCGGT
ATCCCGAAACTGCCAAGCATATTAAGGATGCGATAAATGAGGGGCACTCAGAGGTGTGCACTATCGACAGAGACGGAGCT
GAGGAACGCCGCGAGCAATCATTAAAGGACGTACCTTCCAAAAAGGGATATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCCGCTGACAACCGCGGAGCAGGCTCTTGGGTCGGGCATC
AGCTTACCGATTACCCAGACGGCACAAAGGTTTTATTCACAATTCAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
98.658 |
100 |
0.987 |