Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | GFX43_RS08860 | Genome accession | NZ_CP046448 |
| Coordinates | 1718676..1719086 (+) | Length | 136 a.a. |
| NCBI ID | WP_009967785.1 | Uniprot ID | A0A6I4D881 |
| Organism | Bacillus subtilis strain ZD01 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 1713676..1724086
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GFX43_RS08830 (GFX43_008830) | yrkP | 1714374..1715069 (+) | 696 | WP_015384143.1 | two-component response regulator YrkP | - |
| GFX43_RS08835 (GFX43_008835) | yrkQ | 1715056..1716354 (+) | 1299 | WP_015483453.1 | two-component system sensor histidine kinase YrkQ | - |
| GFX43_RS08840 (GFX43_008840) | psiE | 1716400..1716816 (+) | 417 | WP_003246154.1 | phosphate-starvation-inducible protein PsiE | - |
| GFX43_RS08845 (GFX43_008845) | - | 1717357..1717521 (+) | 165 | WP_015483452.1 | hypothetical protein | - |
| GFX43_RS08850 (GFX43_008850) | - | 1717479..1717670 (+) | 192 | Protein_1714 | recombinase family protein | - |
| GFX43_RS08855 (GFX43_008855) | sigK | 1717752..1718480 (-) | 729 | WP_013308023.1 | RNA polymerase sporulation sigma factor SigK | - |
| GFX43_RS08860 (GFX43_008860) | nucA/comI | 1718676..1719086 (+) | 411 | WP_009967785.1 | sporulation-specific Dnase NucB | Machinery gene |
| GFX43_RS08865 (GFX43_008865) | yqeB | 1719119..1719841 (-) | 723 | WP_015384139.1 | hypothetical protein | - |
| GFX43_RS08870 (GFX43_008870) | gnd | 1720093..1720986 (+) | 894 | WP_015384138.1 | phosphogluconate dehydrogenase (NAD(+)-dependent, decarboxylating) | - |
| GFX43_RS08875 (GFX43_008875) | yqeD | 1721005..1721631 (-) | 627 | WP_015384137.1 | TVP38/TMEM64 family protein | - |
| GFX43_RS08880 (GFX43_008880) | cwlH | 1721818..1722570 (+) | 753 | WP_015483449.1 | N-acetylmuramoyl-L-alanine amidase CwlH | - |
| GFX43_RS08885 (GFX43_008885) | yqeF | 1722822..1723553 (+) | 732 | WP_003229964.1 | SGNH/GDSL hydrolase family protein | - |
| GFX43_RS08890 (GFX43_008890) | - | 1723859..1723999 (-) | 141 | WP_003226124.1 | sporulation histidine kinase inhibitor Sda | - |
Sequence
Protein
Download Length: 136 a.a. Molecular weight: 14967.97 Da Isoelectric Point: 5.1853
>NTDB_id=404389 GFX43_RS08860 WP_009967785.1 1718676..1719086(+) (nucA/comI) [Bacillus subtilis strain ZD01]
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
Nucleotide
Download Length: 411 bp
>NTDB_id=404389 GFX43_RS08860 WP_009967785.1 1718676..1719086(+) (nucA/comI) [Bacillus subtilis strain ZD01]
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGAGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGTGAGGAAGGCGGCGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGCACCAGAGTGCTGTTTA
TTGTGCAGTAG
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGAGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGTGAGGAAGGCGGCGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGCACCAGAGTGCTGTTTA
TTGTGCAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
62.609 |
84.559 |
0.529 |