Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ALIDE2_RS19255 Genome accession   NC_015422
Coordinates   4041416..4041820 (+) Length   134 a.a.
NCBI ID   WP_013520430.1    Uniprot ID   A0A420KBZ9
Organism   Alicycliphilus denitrificans K601     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4036416..4046820
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ALIDE2_RS19235 (Alide2_3879) - 4036841..4037077 (+) 237 WP_013520435.1 Fis family transcriptional regulator -
  ALIDE2_RS19240 (Alide2_3880) purH 4037153..4038757 (+) 1605 WP_193353149.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase -
  ALIDE2_RS19245 (Alide2_3881) hemL 4038861..4040165 (-) 1305 WP_013722946.1 glutamate-1-semialdehyde 2,1-aminomutase -
  ALIDE2_RS19250 (Alide2_3882) thiD 4040149..4041051 (-) 903 WP_013722947.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  ALIDE2_RS24690 (Alide2_3883) - 4041191..4041364 (+) 174 WP_013722948.1 rubredoxin -
  ALIDE2_RS19255 (Alide2_3884) pilG 4041416..4041820 (+) 405 WP_013520430.1 response regulator Regulator
  ALIDE2_RS19260 (Alide2_3885) - 4041820..4042185 (+) 366 WP_013520429.1 response regulator -
  ALIDE2_RS19265 (Alide2_3886) - 4042202..4042729 (+) 528 WP_013520428.1 chemotaxis protein CheW -
  ALIDE2_RS19270 (Alide2_3887) - 4042750..4045014 (+) 2265 WP_013520427.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14827.06 Da        Isoelectric Point: 7.7124

>NTDB_id=40437 ALIDE2_RS19255 WP_013520430.1 4041416..4041820(+) (pilG) [Alicycliphilus denitrificans K601]
MATTTTGSTFKVLVVDDSNTIRRSAEIFLKQGGHEVLLADDGFDALAKVNDYRPQLIFCDILMPKLDGYQTCAIIKRNAR
FADTPVVMLSSKDGVFDKARGRMVGCQEYLTKPFTKDQLLQAVQQFGNAQQGAM

Nucleotide


Download         Length: 405 bp        

>NTDB_id=40437 ALIDE2_RS19255 WP_013520430.1 4041416..4041820(+) (pilG) [Alicycliphilus denitrificans K601]
TTGGCTACGACGACAACCGGTTCCACTTTCAAGGTCCTCGTGGTGGACGATAGCAACACCATCCGGCGCAGCGCCGAGAT
CTTCCTCAAGCAGGGCGGCCACGAGGTGCTGCTCGCGGACGACGGCTTCGACGCCCTGGCCAAGGTCAACGATTACCGGC
CCCAGCTGATCTTCTGCGACATCCTGATGCCCAAGCTCGACGGCTATCAGACCTGCGCCATCATCAAGCGCAACGCCCGT
TTCGCCGATACGCCGGTGGTCATGCTGTCGTCCAAGGACGGCGTCTTCGACAAGGCACGCGGCCGCATGGTCGGCTGCCA
GGAATACCTCACCAAGCCATTCACCAAAGACCAGTTGCTGCAGGCCGTACAGCAATTCGGAAATGCGCAACAAGGAGCCA
TGTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(12-124)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A420KBZ9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

57.265

87.313

0.5

Multiple sequence alignment