Detailed information NTG0404228

Bioinformatically predicted

Overview

• Name: comEC/comE3
• Type: Machinery gene
• Locus tag: HWU19_RS06485
• Genome accession: NZ_CP058251
• Coordinates: 1359863..1361176 (-)
• Length: 437 a.a.
• NCBI ID: WP_237016369.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain UBN18
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1354863..1366176

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HWU19_RS06455	nadC	1355328..1356149 (-)	822	WP_237016364.1	carboxylating nicotinate-nucleotide diphosphorylase	-
HWU19_RS06460	nadA	1356149..1357159 (-)	1011	WP_237016365.1	quinolinate synthase NadA	-
HWU19_RS06465	-	1357149..1357952 (-)	804	WP_237016366.1	phosphatidylserine decarboxylase	-
HWU19_RS06470	-	1357946..1358452 (-)	507	WP_000953098.1	DUF6115 domain-containing protein	-
HWU19_RS06475	-	1358465..1358959 (-)	495	WP_237016367.1	hypothetical protein	-
HWU19_RS06480	mqnP	1358952..1359836 (-)	885	WP_237016368.1	menaquinone biosynthesis prenyltransferase MqnP	-
HWU19_RS06485	comEC/comE3	1359863..1361176 (-)	1314	WP_237016369.1	ComEC/Rec2 family competence protein	Machinery gene
HWU19_RS06490	-	1361173..1362639 (-)	1467	WP_237016370.1	replicative DNA helicase	-
HWU19_RS06495	-	1362650..1364044 (-)	1395	WP_237016371.1	NAD(P)H-hydrate dehydratase	-
HWU19_RS06500	crdS	1364047..1365249 (-)	1203	WP_237017069.1	copper-sensing histidine kinase CrdS	-
HWU19_RS06505	crdR	1365215..1365856 (-)	642	WP_237016372.1	copper response regulator transcription factor CrdR	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 50278.12 Da
• Isoelectric Point: 9.7790

>NTDB_id=404228 HWU19_RS06485 WP_237016369.1 1359863..1361176(-) (comEC/comE3) [Helicobacter pylori strain UBN18]
MKDKTFQGAFELLTTPKEYLLCGVILSLLLSLNLYLEYLNYQKLDFSKPTSLNAQILLQYPKTKDQKTYFVLKLQSKGMI
FYTTIKEPLKNLQYRYAQFFGKIKSCSFLESLKSCFFQTYSFSLTREQDFKSHWRRFIDSAHSSALVGNLYRALFIGDSL
NKDLRDRANVLGINHLLAISGFHLGILSTSVYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGVRLLSFKLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQAFFKTSSFWVRSFQIISLS
ALVFLNMLIIVHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDHILNMPLAIPTISVPSPLWLLGAHLFLT
ILSVRSFKVYLNMNVLSAGFFLYCCYQYIIMPSSIVG

Nucleotide

• Length: 1314 bp

>NTDB_id=404228 HWU19_RS06485 WP_237016369.1 1359863..1361176(-) (comEC/comE3) [Helicobacter pylori strain UBN18]
TTGAAAGACAAAACTTTTCAGGGGGCGTTTGAACTTCTTACAACCCCCAAAGAATACTTGTTGTGTGGGGTTATTTTAAG
TCTTTTATTATCACTCAATCTTTATTTAGAATACTTGAATTACCAAAAGCTTGATTTTTCAAAACCGACAAGCCTGAACG
CTCAAATCTTGTTGCAATACCCTAAAACCAAAGATCAAAAAACCTATTTTGTTTTAAAGCTCCAATCAAAGGGCATGATC
TTTTACACCACCATTAAAGAGCCTTTAAAAAACCTCCAATACCGCTATGCGCAATTTTTTGGCAAAATCAAATCTTGCTC
GTTTTTGGAGTCTCTAAAATCATGCTTTTTTCAAACTTATTCTTTTTCTTTAACACGAGAACAAGATTTCAAATCGCATT
GGCGCCGTTTCATTGATAGCGCTCATTCAAGCGCTTTAGTGGGTAATTTGTATCGAGCGTTGTTTATAGGGGATAGCTTG
AATAAAGACTTAAGAGATAGGGCTAACGTGCTAGGGATCAACCACTTACTAGCTATTAGCGGATTCCATTTAGGGATTTT
GAGCACGAGCGTGTATTTTCTTTTCTCTCTTTTTTATACCCCCTTACAAAAACGCTATTTCCCTTATAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTAGGGTATTTATTGTTATTAGATTTTTTACCCTCTTTTTTTAGGGCG
TTTTTAATGGGCTTGTTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGCTTTTGAGTTTTAAACTTTTGATTTTAGCATG
CTGTATCGCTATAGCGTTACTCCCTAAATTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGTTTGTGGGGTGTGGTATATCT
TTTTATTTTTAAAACACACTCAAGCCTTTTTTAAAACCTCTTCTTTTTGGGTGCGATCTTTTCAGATCATAAGCTTAAGT
GCGCTAGTGTTTTTGAACATGCTCATCATTGTGCATGCCTTTTTCCCTATGTTTTCGCCCTACCAACTCTTTAGCATTCC
TTTAGGCTTGATTTTTATCGTGTTTTTCCCTTTGAGTTTATTCTTGCATGCTGTGGGTTTGGGGTCTTTGTTGGATCATA
TTTTAAACATGCCTTTAGCTATCCCCACGATTTCGGTTCCTTCGCCTTTATGGCTTTTAGGGGCGCATTTATTTTTAACG
ATTCTGAGTGTGCGTTCTTTTAAAGTTTATTTAAACATGAATGTTTTAAGCGCGGGCTTTTTCTTGTATTGTTGCTATCA
ATATATTATAATGCCTAGTTCAATTGTAGGTTAG

Domains

Predicted by InterProScan.

• Competence protein (Competence) (159-379)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/comE3	Helicobacter pylori 26695	93.593	100	0.936